SEED Subsystem: Peptidoglycan Biosynthesis in Pseudomonas fluorescens FW300-N2E3

Experiments:

Role Gene Name nitrate 200 mM  
⨯
Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) AO353_15310 N.D.
  AO353_19475 +0.1
D-alanine--D-alanine ligase (EC 6.3.2.4) AO353_15350 N.D.
D-alanine--D-alanine ligase A (EC 6.3.2.4) No genes
D-alanine--D-alanine ligase B (EC 6.3.2.4) No genes
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) AO353_00765 -1.6
  AO353_06455 -3.4
Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) AO353_10380 N.D.
Glutamate racemase (EC 5.1.1.3) AO353_14800 N.D.
Glutamine synthetase type I (EC 6.3.1.2) AO353_12170 N.D.
Glutamine synthetase type II, eukaryotic (EC 6.3.1.2) No genes
Glutamine synthetase type III, GlnN (EC 6.3.1.2) No genes
Glutamine synthetase, clostridia type (EC 6.3.1.2) No genes
Membrane-bound lytic murein transglycosylase B (EC 3.2.1.-) No genes
Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) AO353_06430 +1.2
  AO353_06465 -0.3
Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) AO353_08230 -0.1
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) AO353_12470 +2.0
  AO353_14475 -1.9
  AO353_15515 -0.1
Murein-DD-endopeptidase (EC 3.4.99.-) AO353_20135 +0.1
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) AO353_10380 N.D.
N-acetylglucosamine-1-phosphate uridyltransferase eukaryotic (EC 2.7.7.23) No genes
Penicillin-binding protein 2 (PBP-2) AO353_06475 N.D.
Penicillin-binding protein 4 precursor No genes
Penicillin-binding protein PBP2a, methicillin resistance determinant MecA, transpeptidase No genes
Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C No genes
Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) AO353_15325 N.D.
Putative glutamine synthetase, Rickettsiales type (EC 6.3.1.2) No genes
Rare lipoprotein A precursor AO353_06460 -1.5
Rod shape-determining protein RodA AO353_06470 N.D.
UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) AO353_01430 N.D.
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) AO353_05120 N.D.
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) AO353_15340 N.D.
UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) AO353_15345 N.D.
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) AO353_15330 N.D.
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) AO353_15315 N.D.
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) AO353_15320 N.D.

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