SEED Subsystem: Pentose phosphate pathway in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name Doxycycline hyclate 0.0001 mg/ml  
⨯
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) Pf6N2E2_757 +1.5
6-phosphogluconolactonase (EC 3.1.1.31) Pf6N2E2_1924 -0.1
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type Pf6N2E2_2884 N.D.
Fructose-6-phosphate phosphoketolase (EC 4.1.2.22) No genes
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) Pf6N2E2_2885 +0.6
  Pf6N2E2_758 +0.2
Ribose 5-phosphate isomerase A (EC 5.3.1.6) Pf6N2E2_3937 N.D.
Ribose 5-phosphate isomerase B (EC 5.3.1.6) No genes
Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) Pf6N2E2_5216 N.D.
  Pf6N2E2_844 -0.1
Ribulose-phosphate 3-epimerase (EC 5.1.3.1) Pf6N2E2_4820 N.D.
Transaldolase (EC 2.2.1.2) Pf6N2E2_2258 -1.5
Transketolase (EC 2.2.1.1) Pf6N2E2_4655 N.D.
Transketolase, C-terminal section (EC 2.2.1.1) Pf6N2E2_1740 +0.0
Transketolase, N-terminal section (EC 2.2.1.1) Pf6N2E2_1741 -0.1
Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9) No genes

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