SEED Subsystem: DNA-replication in Sinorhizobium meliloti 1021

Experiments:

Role Gene Name Cisplatin 0.001 mg/ml  
⨯
ATP-dependent DNA helicase RecG (EC 3.6.1.-) SMc00228 -2.4
ATP-dependent DNA helicase RecQ SMc01566 +0.1
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA SMc00617 N.D.
  SMc01167 N.D.
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) SMc03967 -2.4
DNA polymerase I (EC 2.7.7.7) SMc02850 -3.8
DNA polymerase II (EC 2.7.7.7) No genes
DNA polymerase III alpha subunit (EC 2.7.7.7) SM_b20520 -0.1
  SMc01375 N.D.
DNA polymerase III beta subunit (EC 2.7.7.7) SMc00415 N.D.
DNA polymerase III chi subunit (EC 2.7.7.7) SMc00586 N.D.
DNA polymerase III delta prime subunit (EC 2.7.7.7) SMc01190 N.D.
DNA polymerase III delta subunit (EC 2.7.7.7) SMc02802 N.D.
DNA polymerase III epsilon subunit (EC 2.7.7.7) SMc02789 N.D.
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) SMc02905 N.D.
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) SMc01567 N.D.
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN SMc01877 -3.4
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) No genes
Helicase PriA essential for oriC/DnaA-independent DNA replication SMc02496 N.D.
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA SMc03966 N.D.
Holliday junction DNA helicase RuvB SMc03965 N.D.
Primosomal protein I No genes
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein SMc00760 -1.5
Recombination protein RecR SMc02908 -3.5
Replicative DNA helicase (EC 3.6.1.-) SMc00561 N.D.
  SMc01749 +0.0
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) SMc00292 N.D.
Transcription-repair coupling factor SMc04450 -0.6

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