SEED Subsystem: mycolic acid synthesis in Dyella japonica UNC79MFTsu3.2

Experiments:

Role Gene Name Nalidixic 0.08 mg/ml  
⨯
3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III FABH (BETA-KETOACYL-ACP SYNTHASE III) (KAS III) No genes
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) ABZR86_RS00075 -0.6
  ABZR86_RS04030 +0.4
  ABZR86_RS05810 +0.3
  ABZR86_RS06170 N.D.
  ABZR86_RS08895 +0.1
  ABZR86_RS12860 -0.2
  ABZR86_RS15390 +1.2
  ABZR86_RS17295 +0.1
  ABZR86_RS18340 +0.1
  ABZR86_RS20760 +0.0
  ABZR86_RS21075 -0.6
3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41) No genes
ACETYL/PROPIONYL-CoA CARBOXYLASE (BETA SUBUNIT) ACCD6 No genes
Acyl carrier protein ABZR86_RS06165 N.D.
CONSERVED TRANSMEMBRANE TRANSPORT PROTEIN MMPL7 No genes
CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 1 CMAA1 (CYCLOPROPANE FATTY ACID SYNTHASE) (CFA SYNTHASE) (CYCLOPROPANE MYCOLIC ACID SYNTHASE 1) No genes
CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 2 CMAA2 (CYCLOPROPANE FATTY ACID SYNTHASE) (CFA SYNTHASE) (CYCLOPROPANE MYCOLIC ACID SYNTHASE 2) (MYCOLIC ACID TRANS-CYCLOPROPANE SYNTHETASE) No genes
Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) ABZR86_RS07295 -0.0
FATTY-ACID-CoA LIGASE FADD26 (FATTY-ACID-COA SYNTHETASE) (FATTY-ACID-CoA SYNTHASE) No genes
METHOXY MYCOLIC ACID SYNTHASE 1 MMAA1 (METHYL MYCOLIC ACID SYNTHASE 1) (MMA1) (HYDROXY MYCOLIC ACID SYNTHASE) No genes
METHOXY MYCOLIC ACID SYNTHASE 2 MMAA2 (METHYL MYCOLIC ACID SYNTHASE 2) (MMA2) (HYDROXY MYCOLIC ACID SYNTHASE) No genes
METHOXY MYCOLIC ACID SYNTHASE 3 MMAA3 (METHYL MYCOLIC ACID SYNTHASE 3) (MMA3) (HYDROXY MYCOLIC ACID SYNTHASE) No genes
METHOXY MYCOLIC ACID SYNTHASE 4 MMAA4 (METHYL MYCOLIC ACID SYNTHASE 4) (MMA4) (HYDROXY MYCOLIC ACID SYNTHASE) No genes
MYCOLIC ACID SYNTHASE (PcaA/UmaA2) (CYCLOPROPANE SYNTHASE) No genes
Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) ABZR86_RS06175 N.D.
PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETIDE SYNTHASE PPSC No genes
PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETIDE SYNTHASE PPSD No genes
PHENOLPTHIOCEROL SYNTHESIS TYPE-I POLYKETIDE SYNTHASE PPSE No genes
POSSIBLE ACYL-[ACYL-CARRIER PROTEIN] DESATURASE DESA2 (ACYL-[ACP] DESATURASE) (STEAROYL-ACP DESATURASE) No genes
POSSIBLE CONSERVED POLYKETIDE SYNTHASE ASSOCIATED PROTEIN PAPA5 No genes
POSSIBLE LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE) No genes
POSSIBLE MYCOLIC ACID SYNTHASE UMAA1 No genes
PROBABLE DAUNORUBICIN-DIM-TRANSPORT ATP-BINDING PROTEIN ABC TRANSPORTER DRRA No genes
PROBABLE DAUNORUBICIN-DIM-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER DRRB No genes
PROBABLE DAUNORUBICIN-DIM-TRANSPORT INTEGRAL MEMBRANE PROTEIN ABC TRANSPORTER DRRC No genes
PROBABLE MULTIFUNCTIONAL MYCOCEROSIC ACID SYNTHASE MEMBRANE-ASSOCIATED MAS No genes
Phenolpthiocerol synthesis polyketide synthase ppsA No genes
Phenolpthiocerol synthesis polyketide synthase ppsB No genes
Probable acyl-[acyl-carrier protein] desaturase DESA1 (Acyl-[ACP] desaturase) (Stearoyl-ACP desaturase) (Protein DES) (EC 1.14.19.2) No genes
SECRETED ANTIGEN 85-A FBPA (MYCOLYL TRANSFERASE 85A) (FIBRONECTIN-BINDING PROTEIN A) (ANTIGEN 85 COMPLEX A) No genes
SECRETED ANTIGEN 85-B FBPB (85B) (ANTIGEN 85 COMPLEX B) (MYCOLYL TRANSFERASE 85B) (FIBRONECTIN-BINDING PROTEIN B) (EXTRACELLULAR ALPHA-ANTIGEN) No genes
SECRETED ANTIGEN 85-C FBPC (85C) (ANTIGEN 85 COMPLEX C) (AG58C) (MYCOLYL TRANSFERASE 85C) (FIBRONECTIN-BINDING PROTEIN C) No genes
acyl-CoA synthetase No genes

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