SEED Subsystem: Nitrate and nitrite ammonification in Sinorhizobium meliloti 1021

Experiments:

Role Gene Name nitrate (N)  
⨯
Assimilatory nitrate reductase large subunit (EC:1.7.99.4) SM_b20986 -1.4
Cytochrome c nitrite reductase, small subunit NrfH No genes
Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly No genes
Cytochrome c-type protein NapC SMa0657 +0.2
  SMa0659 +0.0
  SMa1232 -0.6
Cytochrome c-type protein NrfB precursor No genes
Cytochrome c552 precursor (EC 1.7.2.2) No genes
Ferredoxin--nitrite reductase (EC 1.7.7.1) No genes
Ferredoxin-type protein NapF (periplasmic nitrate reductase) SMa1240 -0.4
Ferredoxin-type protein NapG (periplasmic nitrate reductase) No genes
Nitrate ABC transporter, ATP-binding protein SMa0581 -0.0
Nitrate ABC transporter, nitrate-binding protein SM_b21114 -0.1
  SMa0585 +0.2
Nitrate ABC transporter, permease protein No genes
Nitrate reductase cytochrome c550-type subunit SMa1233 -0.4
Nitrate/nitrite response regulator protein SM_b20078 +0.6
Nitrate/nitrite sensor protein (EC 2.7.3.-) No genes
Nitrate/nitrite transporter SM_b20436 +0.1
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) SM_b20984 -5.2
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) SM_b20985 N.D.
Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4) No genes
Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4) No genes
Nitrite transporter NirC No genes
Nitrite transporter from formate/nitrite family No genes
NrfC protein No genes
NrfD protein No genes
Periplasmic nitrate reductase component NapD No genes
Periplasmic nitrate reductase component NapE SMa1241 N.D.
Periplasmic nitrate reductase component NapL No genes
Periplasmic nitrate reductase precursor (EC 1.7.99.4) SMa1236 -0.1
Polyferredoxin NapH (periplasmic nitrate reductase) No genes
Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly No genes
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) No genes
Respiratory nitrate reductase beta chain (EC 1.7.99.4) No genes
Respiratory nitrate reductase delta chain (EC 1.7.99.4) No genes
Respiratory nitrate reductase gamma chain (EC 1.7.99.4) No genes
Respiratory nitrate reductase subunit, conjectural (EC 1.7.99.4) No genes
Response regulator NasT SM_b21115 -6.3

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