SEED Subsystem: tRNA processing in Dyella japonica UNC79MFTsu3.2

Experiments:

Role Gene Name Tetracycline 0.024 mg/ml  
⨯
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) ABZR86_RS22080 +0.0
Ribonuclease D (EC 3.1.26.3) ABZR86_RS07350 +0.4
Ribonuclease P protein component (EC 3.1.26.5) ABZR86_RS15125 N.D.
Ribonuclease PH (EC 2.7.7.56) ABZR86_RS11900 -3.6
Ribonuclease T (EC 3.1.13.-) ABZR86_RS08225 +0.2
Ribonuclease Z (EC 3.1.26.11) No genes
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) ABZR86_RS06605 -0.2
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) ABZR86_RS08015 -0.5
  ABZR86_RS18320 +0.1
tRNA pseudouridine synthase B (EC 4.2.1.70) ABZR86_RS06015 -0.9
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase ABZR86_RS09895 -1.5
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) ABZR86_RS05355 N.D.
tRNAHis-5'-guanylyltransferase No genes

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