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SEED Subsystem: Phosphate metabolism in
Pseudomonas syringae pv. syringae B728a
Experiments:
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Role
Gene
Name
epiphytic; Green bean
⨯
1-acyl-sn-glycerol-3-phosphate acyltransferase (
EC 2.3.1.51
)
Psyr
_0009
N.D.
Psyr
_1586
+0.0
Psyr
_4049
+0.1
Alkaline phosphatase (
EC 3.1.3.1
)
Psyr
_3074
-0.1
Psyr
_3089
-0.0
Psyr
_3983
+0.1
Alkaline phosphatase like protein
No genes
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP
No genes
Apolipoprotein N-acyltransferase (EC 2.3.1.-)
Psyr
_4349
N.D.
Distant similarity with phosphate transport system regulator
No genes
Exopolyphosphatase (
EC 3.6.1.11
)
Psyr
_0294
-2.1
FIG000233: metal-dependent hydrolase
No genes
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (
EC 3.6.1.40
)
No genes
Inorganic pyrophospatase PpaX (
EC 3.1.3.18
)
No genes
Inorganic pyrophosphatase (
EC 3.6.1.1
)
Psyr
_0624
N.D.
Psyr
_1481
+0.0
Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)
Psyr
_0475
-1.0
Low-affinity inorganic phosphate transporter
Psyr
_1773
+0.1
Psyr
_4016
N.D.
Magnesium and cobalt efflux protein CorC
Psyr
_1279
+0.2
Psyr
_4348
N.D.
Manganese-dependent inorganic pyrophosphatase (
EC 3.6.1.1
)
No genes
NAD(P) transhydrogenase alpha subunit (
EC 1.6.1.2
)
Psyr
_5016
+0.1
Psyr
_5017
+0.3
NAD(P) transhydrogenase subunit beta (
EC 1.6.1.2
)
Psyr
_5018
-0.0
Na/Pi cotransporter II-related protein
No genes
Phosphatase, Ppx/GppA family
No genes
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
Psyr
_2475
+0.1
Psyr
_3106
+0.1
Psyr
_5041
-0.0
Phosphate regulon sensor protein PhoR (SphS) (
EC 2.7.13.3
)
Psyr
_5033
+0.0
Phosphate regulon transcriptional regulatory protein PhoB (SphR)
Psyr
_5032
-0.2
Phosphate starvation-inducible ATPase PhoH with RNA binding motif
No genes
Phosphate starvation-inducible protein PhoH, predicted ATPase
Psyr
_4346
+0.2
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
Psyr
_3103
-0.2
Psyr
_5038
-0.5
Phosphate transport regulator (distant homolog of PhoU)
No genes
Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
Psyr
_3104
-0.3
Psyr
_5039
+0.1
Phosphate transport system permease protein PstC (TC 3.A.1.7.1)
Psyr
_3105
+0.2
Psyr
_5040
-0.1
Phosphate transport system regulatory protein PhoU
Psyr
_5037
N.D.
Phosphate-specific outer membrane porin OprP
No genes
Polyphosphate kinase (
EC 2.7.4.1
)
Psyr
_0293
-0.4
Predicted ATPase related to phosphate starvation-inducible protein PhoH
Psyr
_1066
-0.1
Probable low-affinity inorganic phosphate transporter
No genes
Putative periplasmic phosphate-binding protein PstS (Mycoplasma type)
No genes
Pyrophosphate-energized proton pump (
EC 3.6.1.1
)
No genes
Pyrophosphate-specific outer membrane porin OprO
No genes
Sodium-dependent phosphate transporter
Psyr
_0069
-0.3
Soluble pyridine nucleotide transhydrogenase (
EC 1.6.1.1
)
Psyr
_1901
N.D.
putative alkaline phosphatase-like protein
No genes
response regulator in two-component regulatory system with PhoQ
No genes
secreted alkaline phosphatase
No genes
Or select organism:
Acidovorax sp. GW101-3H11
Acinetobacter radioresistens SK82
Agrobacterium fabrum C58
Alteromonas macleodii MIT1002
Azospirillum brasilense Sp245
Azospirillum sp. SherDot2
Bacteroides ovatus ATCC 8483
Bacteroides stercoris CC31F
Bacteroides thetaiotaomicron VPI-5482
Bifidobacterium breve UCC2003
Bosea sp. OAE506
Brevundimonas sp. GW460-12-10-14-LB2
Burkholderia phytofirmans PsJN
Castellaniella sp019104865 MT123
Caulobacter crescentus NA1000
Caulobacter crescentus NA1000 Δfur
Cellulophaga baltica 18
Cupriavidus basilensis FW507-4G11
Dechlorosoma suillum PS
Desulfovibrio vulgaris Hildenborough JW710
Desulfovibrio vulgaris Miyazaki F
Dickeya dadantii 3937
Dickeya dianthicola 67-19
Dickeya dianthicola ME23
Dinoroseobacter shibae DFL-12
Dyella japonica UNC79MFTsu3.2
Echinicola vietnamensis KMM 6221, DSM 17526
Enterobacter asburiae PDN3
Enterobacter sp. TBS_079
Erwinia amylovora T8
Erwinia tracheiphila SCR3
Escherichia coli BL21
Escherichia coli BW25113
Escherichia coli ECOR27
Escherichia coli ECOR38
Escherichia coli ECRC100
Escherichia coli ECRC101
Escherichia coli ECRC102
Escherichia coli ECRC62
Escherichia coli ECRC98
Escherichia coli ECRC99
Escherichia coli HS(pFamp)R (ATCC 700891)
Escherichia coli Nissle 1917
Escherichia fergusonii Becca
Fusobacterium nucleatum SB010
Herbaspirillum seropedicae SmR1
Hydrogenophaga sp. GW460-11-11-14-LB1
Kangiella aquimarina DSM 16071
Klebsiella michiganensis M5al
Lysobacter sp. OAE881
Magnetospirillum magneticum AMB-1
Marinobacter adhaerens HP15
Methanococcus maripaludis JJ
Methanococcus maripaludis S2
Methylophilus sp. DMC18
Mucilaginibacter yixingensis YX-36 DSM 26809
Mycobacterium tuberculosis H37Rv
Pantoea sp. MT58
Parabacteroides merdae CL09T00C40
Paraburkholderia bryophila 376MFSha3.1
Paraburkholderia graminis OAS925
Paraburkholderia sabiae LMG 24235
Pectobacterium carotovorum WPP14
Pedobacter sp. GW460-11-11-14-LB5
Phaeobacter inhibens DSM 17395
Phocaeicola dorei CL03T12C01
Phocaeicola vulgatus CL09T03C04
Pontibacter actiniarum KMM 6156, DSM 19842
Pseudomonas aeruginosa PA14
Pseudomonas fluorescens FW300-N1B4
Pseudomonas fluorescens FW300-N2C3
Pseudomonas fluorescens FW300-N2E2
Pseudomonas fluorescens FW300-N2E3
Pseudomonas fluorescens GW456-L13
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens SBW25-INTG
Pseudomonas putida KT2440
Pseudomonas simiae WCS417
Pseudomonas sp. BP01
Pseudomonas sp. DMC3
Pseudomonas sp. RS175
Pseudomonas sp. S08-1
Pseudomonas sp. SVBP6
Pseudomonas stutzeri RCH2
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. syringae B728a ΔmexB
Rahnella sp. WP5
Ralstonia solanacearum GMI1000
Ralstonia solanacearum IBSBF1503
Ralstonia solanacearum PSI07
Ralstonia solanacearum UW163
Ralstonia sp. UNC404CL21Col
Rhizobium sp. OAE497
Rhodanobacter denitrificans FW104-10B01
Rhodanobacter denitrificans MT42
Rhodanobacter sp. FW510-T8
Rhodanobacter sp000427505 FW510-R12
Rhodopseudomonas palustris CGA009
Rhodospirillum rubrum S1H
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Serratia liquefaciens MT49
Shewanella amazonensis SB2B
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella sp. ANA-3
Sinorhizobium meliloti 1021
Sphingomonas koreensis DSMZ 15582
Synechococcus elongatus PCC 7942
Synechocystis sp000284455 PCC 6803
Variovorax sp. OAS795
Variovorax sp. SCN45
Vibrio cholerae E7946 ATCC 55056
Xanthobacter sp. DMC5
Xanthomonas campestris pv. campestris strain 8004
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