SEED Subsystem: D-gluconate and ketogluconates metabolism in Herbaspirillum seropedicae SmR1

Experiments:

Role Gene Name D,L-Lactate (C)  
2,5-diketo-D-gluconate reductase A (EC 1.1.1.274) No genes
2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274) No genes
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, cytochrome c HSERO_RS08315 +0.4
  HSERO_RS18760 +0.2
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, flavoprotein HSERO_RS08310 -0.2
  HSERO_RS18755 -0.1
2-Keto-D-gluconate dehydrogenase (EC 1.1.99.4), membrane-bound, gamma subunit HSERO_RS18750 +0.0
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) HSERO_RS07545 -0.2
  HSERO_RS08715 -0.1
2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) No genes
5-keto-D-gluconate 5-reductase (EC 1.1.1.69) HSERO_RS05480 +0.0
Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldA No genes
Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldB No genes
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, cytochrome c HSERO_RS16735 -1.8
  HSERO_RS22390 +0.0
  HSERO_RS22810 -0.2
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, flavoprotein HSERO_RS16740 -2.2
  HSERO_RS22385 +0.0
  HSERO_RS22805 -0.3
Gluconate 2-dehydrogenase (EC 1.1.99.3), membrane-bound, gamma subunit HSERO_RS16745 -2.0
  HSERO_RS22380 +0.2
  HSERO_RS22800 +0.1
Gluconate operon transcriptional repressor No genes
Gluconate permease No genes
Gluconate permease, Bsu4004 homolog No genes
Gluconate transporter family protein HSERO_RS08740 +0.3
  HSERO_RS10490 -0.2
Gluconate utilization system Gnt-I transcriptional repressor HSERO_RS05460 +0.3
Gluconokinase (EC 2.7.1.12) HSERO_RS05475 +0.1
Glucose 1-dehydrogenase (EC 1.1.1.47) No genes
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, cytochrome c No genes
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, flavoprotein No genes
Glucose dehydrogenase (EC 1.1.99.10), membrane-bound, gamma subunit HSERO_RS08305 -0.2
Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) No genes
High-affinity gluconate transporter GntT No genes
Hypothetical oxidoreductase YqhD (EC 1.1.-.-) No genes
Hypothetical transcriptional regulator YqhC HSERO_RS01580 -0.2
L-idonate 5-dehydrogenase (EC 1.1.1.264) HSERO_RS05485 -0.1
L-idonate, D-gluconate, 5-keto-D-gluconate transporter No genes
Low-affinity gluconate/H+ symporter GntU HSERO_RS05470 +0.0
Positive regulator of L-idonate catabolism No genes
Predicted gluconate TRAP family transporter, DctM subunit HSERO_RS05555 +0.0
  HSERO_RS19060 +0.2
Predicted gluconate TRAP family transporter, DctP subunit No genes
Predicted gluconate TRAP family transporter, DctQ subunit No genes

Or select organism:

Or view this subsystem at the SEED (slow)