SEED Subsystem: D-ribose utilization in Herbaspirillum seropedicae SmR1

Experiments:

Role Gene Name L-mannose (C)  
⨯
Predicted nucleoside ABC transporter, ATP-binding component No genes
Predicted nucleoside ABC transporter, permease 1 component No genes
Predicted nucleoside ABC transporter, permease 2 component No genes
Predicted nucleoside ABC transporter, substrate-binding component No genes
Predicted regulator of ribose utilization, LacI family No genes
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5) No genes
Ribokinase (EC 2.7.1.15) HSERO_RS05105 -0.1
  HSERO_RS11500 -1.0
Ribose 5-phosphate isomerase A (EC 5.3.1.6) HSERO_RS17335 N.D.
Ribose 5-phosphate isomerase B (EC 5.3.1.6) No genes
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) HSERO_RS03640 -4.4
  HSERO_RS05090 -0.1
  HSERO_RS05250 +0.0
  HSERO_RS11485 -0.1
  HSERO_RS20105 -0.1
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) HSERO_RS11505 -0.3
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) HSERO_RS11480 -0.4
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) HSERO_RS03645 -2.9
  HSERO_RS05085 -0.2
  HSERO_RS05100 -0.2
  HSERO_RS05255 +0.1
  HSERO_RS05325 -0.5
  HSERO_RS07090 +0.1
  HSERO_RS07095 +0.2
  HSERO_RS11490 -0.7
  HSERO_RS19340 +0.1
  HSERO_RS20095 +0.1
Ribose operon repressor HSERO_RS01360 N.D.
  HSERO_RS11495 -3.1
  HSERO_RS13075 -0.0
Ribose/xylose/arabinose/galactoside ABC-type transport systems, ATP-binding protein (EC 3.6.3.17) No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, periplasmic sugar binding protein No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 1 No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 2 No genes

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Or view this subsystem at the SEED (slow)