SEED Subsystem: linker unit-arabinogalactan synthesis in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name 24hr PHYTO4 MOI 10  
⨯
Galactofuranosyl transferase (EC 2.-.-.-) No genes
Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) BPHYT_RS04270 N.D.
  BPHYT_RS30995 +1.7
INTEGRAL MEMBRANE INDOLYLACETYLINOSITOL ARABINOSYLTRANSFERASE EMBA (ARABINOSYLINDOLYLACETYLINOSITOL SYNTHASE) No genes
INTEGRAL MEMBRANE INDOLYLACETYLINOSITOL ARABINOSYLTRANSFERASE EMBB (ARABINOSYLINDOLYLACETYLINOSITOL SYNTHASE) No genes
INTEGRAL MEMBRANE INDOLYLACETYLINOSITOL ARABINOSYLTRANSFERASE EMBC (ARABINOSYLINDOLYLACETYLINOSITOL SYNTHASE) No genes
PROBABLE dTDP-RHA:A-D-GlcNAc-DIPHOSPHORYL POLYPRENOL, A-3-L-RHAMNOSYL TRANSFERASE WBBL1 (ALPHA-L-RHAMNOSE-(1->3)-ALPHA-D-GlcNAc(1->P)-P-DECAPRENYL) No genes
UDP-galactopyranose mutase (EC 5.4.99.9) BPHYT_RS04150 +0.4
UDP-glucose 4-epimerase (EC 5.1.3.2) BPHYT_RS04260 +0.2
  BPHYT_RS04375 N.D.
  BPHYT_RS04450 +0.7
  BPHYT_RS07405 -0.5
  BPHYT_RS23350 -0.2
  BPHYT_RS24115 -0.4
  BPHYT_RS24165 -0.7
  BPHYT_RS31050 -0.6
  BPHYT_RS33225 +2.3
dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) BPHYT_RS04275 N.D.
  BPHYT_RS07205 N.D.
  BPHYT_RS30990 -1.4
dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) BPHYT_RS04280 N.D.
  BPHYT_RS06855 +1.1
  BPHYT_RS30985 N.D.
dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) BPHYT_RS04265 N.D.
  BPHYT_RS31000 N.D.
undecaprenyl-phosphate alpha-n-acetylglucosaminyltransferase No genes

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