SEED Subsystem: Homogentisate pathway of aromatic compound degradation in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1  
⨯
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) BPHYT_RS18295 -0.1
  BPHYT_RS22675 +0.0
  BPHYT_RS33445 -0.3
Aromatic-amino-acid aminotransferase (EC 2.6.1.57) BPHYT_RS06900 -3.1
  BPHYT_RS26755 +0.4
  BPHYT_RS32285 -0.1
  BPHYT_RS32640 +0.0
Fumarylacetoacetase (EC 3.7.1.2) BPHYT_RS02800 +0.0
  BPHYT_RS03805 -0.3
  BPHYT_RS11790 -0.6
Homogentisate 1,2-dioxygenase (EC 1.13.11.5) BPHYT_RS03800 +0.8
Maleylacetoacetate isomerase (EC 5.2.1.2) BPHYT_RS05050 +0.4
Possible 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-) No genes
Transcriptional regulator, IclR family BPHYT_RS00915 -1.7
  BPHYT_RS02330 -1.5
  BPHYT_RS03785 -0.2
  BPHYT_RS07795 +0.2
  BPHYT_RS13390 +0.3
  BPHYT_RS13595 -4.3
  BPHYT_RS18385 +0.1
  BPHYT_RS19975 +0.0
  BPHYT_RS20330 +0.0
  BPHYT_RS20440 -0.6
  BPHYT_RS21735 +0.9
  BPHYT_RS21740 -1.2
  BPHYT_RS21765 +0.0
  BPHYT_RS21905 -0.4
  BPHYT_RS22020 -1.0
  BPHYT_RS28630 +0.4
  BPHYT_RS28665 N.D.
  BPHYT_RS28705 -2.9
  BPHYT_RS29425 -1.4
  BPHYT_RS34255 +0.6
  BPHYT_RS34920 +0.5
  BPHYT_RS34960 N.D.
  BPHYT_RS35690 N.D.
  BPHYT_RS35695 N.D.

Or select organism:

Or view this subsystem at the SEED (slow)