SEED Subsystem: Folate Biosynthesis in Enterobacter sp. TBS_079

Experiments:

Role Gene Name Plant=SorghumBicolor_Rtx430; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB_Kan50; Time=28_days; NumberPlantsPooled=4; CocultureWith=Inquilinus sp. 005-A5  
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2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) MPMX20_00828 N.D.
5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) MPMX20_03770 -2.9
5-nucleotidase SurE (EC 3.1.3.5) MPMX20_03630 -1.9
6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12) No genes
ATPase component of general energizing module of ECF transporters No genes
Alternative Folylglutamate Synthase No genes
Alternative dihydrofolate reductase 2 No genes
Alternative dihydrofolate reductase 3 No genes
Aminodeoxychorismate lyase (EC 4.1.3.38) MPMX20_01776 -0.4
COG0488: ATPase components of ABC transporters with duplicated ATPase domains MPMX20_01600 +0.1
Dihydrofolate reductase (EC 1.5.1.3) MPMX20_00744 N.D.
  MPMX20_01218 +0.5
Dihydrofolate synthase (EC 6.3.2.12) No genes
Dihydroneopterin aldolase (EC 4.1.2.25) MPMX20_03895 N.D.
Dihydroneopterin triphosphate epimerase MPMX20_03238 +0.5
Dihydroneopterin triphosphate pyrophosphohydolase No genes
Dihydroneopterin triphosphate pyrophosphohydolase type 2 MPMX20_02770 -1.7
Dihydropteroate synthase (EC 2.5.1.15) MPMX20_04081 N.D.
FolM Alternative dihydrofolate reductase 1 MPMX20_02028 +1.5
Folate biosynthesis protein PTPS-III, catalyzes a reaction that bypasses dihydroneopterin aldolase (FolB) No genes
Folate transporter 3 No genes
Folylpolyglutamate synthase (EC 6.3.2.17) No genes
Formate--tetrahydrofolate ligase (EC 6.3.4.3) No genes
GTP cyclohydrolase I (EC 3.5.4.16) type 1 MPMX20_03123 N.D.
GTP cyclohydrolase I (EC 3.5.4.16) type 2 No genes
Methionyl-tRNA formyltransferase (EC 2.1.2.9) MPMX20_04195 N.D.
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) MPMX20_01107 N.D.
Non functional Dihydropteroate synthase 2 No genes
Nucleoside triphosphate pyrophosphohydrolase MazG No genes
Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) MPMX20_04263 -0.2
Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) MPMX20_02717 +0.2
PqqC-like protein No genes
Putative DHNTP pyrophosphatase No genes
Related to Dihydropteroate synthase No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) MPMX20_03420 N.D.
Substrate-specific component FolT of folate ECF transporter No genes
Thymidine kinase (EC 2.7.1.21) MPMX20_02590 -1.7
Thymidylate synthase (EC 2.1.1.45) MPMX20_03690 N.D.
Thymidylate synthase thyX (EC 2.1.1.-) No genes
Transaldolase (EC 2.2.1.2) MPMX20_00716 -0.5
  MPMX20_01465 +1.0
  MPMX20_03325 -0.0
  MPMX20_04526 +0.5
Transmembrane component of general energizing module of ECF transporters No genes
Xanthosine/inosine triphosphate pyrophosphatase No genes
alternate gene name: yzbB No genes

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