SEED Subsystem: tRNA processing in Pseudomonas fluorescens FW300-N2C3

Experiments:

Role Gene Name L-Asparagine (C)  
⨯
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) AO356_05085 -1.1
Ribonuclease D (EC 3.1.26.3) AO356_04420 -0.7
Ribonuclease P protein component (EC 3.1.26.5) AO356_11650 N.D.
Ribonuclease PH (EC 2.7.7.56) AO356_12500 -0.0
Ribonuclease T (EC 3.1.13.-) AO356_18310 N.D.
Ribonuclease Z (EC 3.1.26.11) No genes
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) AO356_05905 -0.6
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) AO356_05610 +0.2
  AO356_21435 -1.2
tRNA pseudouridine synthase B (EC 4.2.1.70) AO356_07400 -0.3
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase AO356_15410 -0.2
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) AO356_06455 N.D.
tRNAHis-5'-guanylyltransferase No genes

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