SEED Subsystem: Pyruvate metabolism I: anaplerotic reactions, PEP in Rahnella sp. WP5

Experiments:

Role Gene Name casaminos (C)  
⨯
Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate EX31_RS05445 -0.5
Biotin carboxyl carrier protein of oxaloacetate decarboxylase No genes
D-malic enzyme (EC 1.1.1.83) No genes
Malate Na(+) symporter EX31_RS13595 +0.0
  EX31_RS17775 -0.2
Malate permease No genes
Malolactic enzyme (EC 1.-.-.-) No genes
Malolactic regulator No genes
Membrane protein associated with oxaloacetate decarboxylase No genes
NAD-dependent malic enzyme (EC 1.1.1.38) EX31_RS01150 +0.2
  EX31_RS18665 -0.3
NADP-dependent malic enzyme (EC 1.1.1.40) EX31_RS20275 +0.0
Oxaloacetate decarboxylase alpha chain (EC 4.1.1.3) No genes
Oxaloacetate decarboxylase beta chain (EC 4.1.1.3) No genes
Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3) No genes
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) EX31_RS04780 -0.8
Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) No genes
Phosphoenolpyruvate carboxylase (EC 4.1.1.31) EX31_RS14200 +0.1
Phosphoenolpyruvate carboxylase, archaeal (EC 4.1.1.31) No genes
Phosphoenolpyruvate synthase (EC 2.7.9.2) EX31_RS13935 -1.8
Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme No genes
Pyruvate carboxyl transferase (EC 6.4.1.1) No genes
Pyruvate carboxyl transferase subunit A (EC 6.4.1.1) No genes
Pyruvate carboxyl transferase subunit B (EC 6.4.1.1) No genes
Pyruvate kinase (EC 2.7.1.40) EX31_RS10640 +0.5
  EX31_RS13870 -0.6
Pyruvate,phosphate dikinase (EC 2.7.9.1) No genes
Two-component response regulator, malate (EC 2.7.3.-) No genes
Two-component sensor histidine kinase, malate (EC 2.7.3.-) No genes

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