SEED Subsystem: L-Arabinose utilization in Rahnella sp. WP5

Experiments:

Role Gene Name D,L-Lactate (C)  
2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) No genes
Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55) EX31_RS03500 +0.1
Alpha-N-arabinofuranosidase (EC 3.2.1.55) No genes
Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) No genes
Alpha-N-arabinofuranosidase II (EC 3.2.1.55) No genes
Alpha-arabinosides ABC transport system, permease protein 1 No genes
Alpha-arabinosides ABC transport system, permease protein 2 No genes
Alpha-arabinosides ABC transport system, substrate-binding protein No genes
Alternative L-arabinose isomerase (EC 5.3.1.4) No genes
Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99) No genes
Arabinose operon protein AraL No genes
Arabinose operon regulatory protein EX31_RS06660 +1.5
Arabinose-proton symporter EX31_RS02645 +0.0
  EX31_RS22975 -0.0
Arabinose-regulated TonB-dependent outer membrane receptor No genes
Hypothetical glycoside hydrolase, family 43, similar to arabinosidase No genes
Hypothetical phosphoglucomutase family hydrolase in arabinose utilization cluster No genes
L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) No genes
L-arabinolactonase (EC 3.1.1.15) No genes
L-arabinose 1-dehydrogenase (EC 1.1.1.46) No genes
L-arabinose isomerase (EC 5.3.1.4) EX31_RS06635 +0.1
L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2) EX31_RS06650 -0.8
L-arabinose transport system permease protein (TC 3.A.1.2.2) EX31_RS06655 -1.2
L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) EX31_RS06645 -0.5
L-arabinose-specific 1-epimerase (mutarotase) No genes
L-arabonate dehydratase (EC 4.2.1.25) No genes
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) EX31_RS04940 -0.1
  EX31_RS09840 -0.2
Possible GPH family transporter (TC 2.A.2) for arabinosides EX31_RS03495 +0.0
Predicted L-arabinose ABC transport system, ATP-binding protein No genes
Predicted L-arabinose ABC transport system, periplasmic arabinose-binding protein No genes
Predicted L-arabinose ABC transport system, permease protein 1 No genes
Predicted L-arabinose ABC transport system, permease protein 2 No genes
Predicted L-arabinose isomerase (EC 5.3.1.4) No genes
Predicted arabinose ABC transporter, permease protein 1 No genes
Predicted arabinose ABC transporter, permease protein 2 No genes
Predicted arabinose ABC transporter, substrate binding protein No genes
Predicted glycerol-1-phosphate dehydrogenase, arabinose operon No genes
Protein AraJ precursor No genes
Putative oxidoreductase in arabinose utilization cluster No genes
Ribulokinase (EC 2.7.1.16) EX31_RS06640 +0.0
Transcriptional regulator of the arabinose operon in Shewanella, GntR family No genes
Transcriptional repressor of arabinoside utilization operon, GntR family No genes
alternative Ribulokinase (EC 2.7.1.16) No genes

Or select organism:

Or view this subsystem at the SEED (slow)