SEED Subsystem: D-ribose utilization in Rahnella sp. WP5

Experiments:

Role Gene Name D,L-Lactate (C)  
⨯
Predicted nucleoside ABC transporter, ATP-binding component No genes
Predicted nucleoside ABC transporter, permease 1 component No genes
Predicted nucleoside ABC transporter, permease 2 component No genes
Predicted nucleoside ABC transporter, substrate-binding component No genes
Predicted regulator of ribose utilization, LacI family No genes
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5) No genes
Ribokinase (EC 2.7.1.15) EX31_RS02830 +0.1
  EX31_RS06190 +0.9
  EX31_RS20755 +0.0
  EX31_RS21565 +0.6
Ribose 5-phosphate isomerase A (EC 5.3.1.6) EX31_RS21465 N.D.
Ribose 5-phosphate isomerase B (EC 5.3.1.6) No genes
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) EX31_RS06175 +0.5
  EX31_RS20770 +0.1
  EX31_RS24020 -0.1
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) EX31_RS06170 +0.1
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) EX31_RS06185 +0.2
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) EX31_RS06180 +0.2
  EX31_RS11590 -0.4
  EX31_RS17425 +0.0
  EX31_RS20765 +0.3
  EX31_RS24015 +0.2
Ribose operon repressor EX31_RS06195 +1.9
  EX31_RS16895 +0.2
  EX31_RS19825 +0.0
Ribose/xylose/arabinose/galactoside ABC-type transport systems, ATP-binding protein (EC 3.6.3.17) EX31_RS17420 +0.2
Ribose/xylose/arabinose/galactoside ABC-type transport systems, periplasmic sugar binding protein EX31_RS17415 +0.0
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 1 EX31_RS17430 -0.0
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 2 No genes

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Or view this subsystem at the SEED (slow)