SEED Subsystem: Multidrug Resistance Efflux Pumps in Herbaspirillum seropedicae SmR1

Experiments:

Role Gene Name Lomefloxacin 0.012 mM  
⨯
Acriflavin resistance protein HSERO_RS01325 +1.3
  HSERO_RS12415 -0.3
Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) HSERO_RS10240 +0.0
Macrolide-specific efflux protein MacA HSERO_RS10245 +0.0
  HSERO_RS17260 -0.5
Membrane fusion protein of RND family multidrug efflux pump No genes
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps No genes
Multidrug efflux RND membrane fusion protein MexC No genes
Multidrug efflux RND transporter MexD No genes
Multidrug efflux pump component MtrF No genes
Multidrug resistance efflux pump PmrA No genes
Multidrug-efflux transporter, major facilitator superfamily (MFS) (TC 2.A.1) No genes
Probable outer membrane component of multidrug efflux pump No genes
Probable transcription regulator protein of MDR efflux pump cluster HSERO_RS01575 -0.0
RND efflux system, inner membrane transporter CmeB HSERO_RS01560 +0.1
  HSERO_RS02410 -4.4
  HSERO_RS06815 -0.1
  HSERO_RS19775 -3.9
  HSERO_RS23055 -0.4
RND efflux system, membrane fusion protein CmeA HSERO_RS01565 +0.4
  HSERO_RS02415 -4.9
  HSERO_RS06810 -0.3
  HSERO_RS23060 -0.3
RND efflux system, outer membrane lipoprotein CmeC HSERO_RS01555 +0.3
  HSERO_RS02405 -4.4
  HSERO_RS06820 -0.1
  HSERO_RS09125 -0.5
  HSERO_RS09735 +0.5
  HSERO_RS10235 -0.5
  HSERO_RS17255 -0.6
  HSERO_RS23050 -0.6
  HSERO_RS23080 -0.2
RND efflux system, outer membrane lipoprotein, NodT family HSERO_RS01330 N.D.
  HSERO_RS07660 +0.0
  HSERO_RS15975 -0.1
Transcription regulator of multidrug efflux pump operon, TetR (AcrR) family HSERO_RS16340 +1.5
Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family HSERO_RS02420 N.D.
Transcriptional regulator NfxB No genes
Type I secretion outer membrane protein, TolC precursor No genes

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