SEED Subsystem: Photorespiration (oxidative C2 cycle) in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name Gly-Glu (C)  
⨯
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) BPHYT_RS08825 -0.2
  BPHYT_RS24130 N.D.
  BPHYT_RS31915 +0.3
  BPHYT_RS31955 +0.2
2-oxoglutarate/malate translocator No genes
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) BPHYT_RS19320 -2.4
Catalase (EC 1.11.1.6) BPHYT_RS03475 -0.0
  BPHYT_RS10310 +0.0
  BPHYT_RS24755 +0.0
  BPHYT_RS26790 -0.1
  BPHYT_RS33265 +0.1
D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) BPHYT_RS03515 +0.4
D-glycerate 3-kinase (EC 2.7.1.31), plant type No genes
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Expressed protein possibly involved in photorespiration No genes
Glycerate kinase (EC 2.7.1.31) BPHYT_RS09440 -0.2
Glycine cleavage system H protein BPHYT_RS19325 -1.6
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) BPHYT_RS19330 -1.9
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE BPHYT_RS03505 +0.3
  BPHYT_RS31650 -0.5
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF BPHYT_RS03500 +0.2
  BPHYT_RS31655 -0.1
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD BPHYT_RS03510 -0.1
  BPHYT_RS31645 -0.1
  BPHYT_RS33430 +0.0
  BPHYT_RS34425 +0.0
Glycolate oxidase (EC 1.1.3.15) No genes
Glycolate permease No genes
Glyoxylate carboligase (EC 4.1.1.47) BPHYT_RS08835 +0.1
Hydroxypyruvate reductase (EC 1.1.1.81) No genes
L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) No genes
Malate synthase (EC 2.3.3.9) BPHYT_RS12305 +0.0
Malate synthase G (EC 2.3.3.9) BPHYT_RS09815 +0.4
  BPHYT_RS31665 N.D.
Malyl-CoA lyase (EC 4.1.3.24) No genes
Phosphoglycolate phosphatase (EC 3.1.3.18) BPHYT_RS17385 +0.0
Ribulose bisphosphate carboxylase (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39) No genes
Ribulose-1,5-bisphosphate carboxylase, Type III (EC 4.1.1.39) No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) BPHYT_RS01260 -0.3
  BPHYT_RS03725 -2.1
  BPHYT_RS25180 -0.5
Serine--glyoxylate aminotransferase (EC 2.6.1.45) BPHYT_RS34440 -0.1

Or select organism:

Or view this subsystem at the SEED (slow)