SEED Subsystem: DNA-replication in Azospirillum brasilense Sp245

Experiments:

Role Gene Name pyruvate (C)  
⨯
ATP-dependent DNA helicase RecG (EC 3.6.1.-) AZOBR_RS09850 -0.2
ATP-dependent DNA helicase RecQ AZOBR_RS02840 -0.1
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA AZOBR_RS01250 N.D.
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) No genes
DNA polymerase I (EC 2.7.7.7) AZOBR_RS30685 -0.7
DNA polymerase II (EC 2.7.7.7) No genes
DNA polymerase III alpha subunit (EC 2.7.7.7) AZOBR_RS03745 +0.2
  AZOBR_RS07305 N.D.
DNA polymerase III beta subunit (EC 2.7.7.7) AZOBR_RS17665 N.D.
  AZOBR_RS28940 -0.1
DNA polymerase III chi subunit (EC 2.7.7.7) AZOBR_RS16390 N.D.
DNA polymerase III delta prime subunit (EC 2.7.7.7) AZOBR_RS08785 N.D.
DNA polymerase III delta subunit (EC 2.7.7.7) AZOBR_RS01835 N.D.
DNA polymerase III epsilon subunit (EC 2.7.7.7) AZOBR_RS01775 -1.8
  AZOBR_RS02950 +0.1
  AZOBR_RS14205 -3.0
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) AZOBR_RS03870 N.D.
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) AZOBR_RS10910 N.D.
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN AZOBR_RS12395 N.D.
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) No genes
Helicase PriA essential for oriC/DnaA-independent DNA replication AZOBR_RS03980 N.D.
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA AZOBR_RS09045 N.D.
Holliday junction DNA helicase RuvB AZOBR_RS09050 N.D.
Primosomal protein I No genes
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein AZOBR_RS11095 -0.5
Recombination protein RecR AZOBR_RS03880 -0.6
Replicative DNA helicase (EC 3.6.1.-) AZOBR_RS08355 N.D.
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) No genes
Transcription-repair coupling factor AZOBR_RS28320 +0.2

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