SEED Subsystem: cAMP signaling in bacteria in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days  
⨯
3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) BPHYT_RS13125 +0.3
  BPHYT_RS13130 +0.3
  BPHYT_RS30030 +0.1
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) BPHYT_RS05770 -0.1
  BPHYT_RS09450 N.D.
  BPHYT_RS15840 +0.5
Adenine phosphoribosyltransferase (EC 2.4.2.7) BPHYT_RS02940 -0.1
Adenylate cyclase (EC 4.6.1.1) BPHYT_RS10340 -0.1
  BPHYT_RS17410 -0.6
  BPHYT_RS19510 +0.0
  BPHYT_RS21390 -0.1
  BPHYT_RS22320 +1.7
  BPHYT_RS33395 -0.3
Adenylate/guanylate cyclase (EC 4.6.1.2) No genes
CAMP phosphodiesterases class-II:Metallo-beta-lactamase superfamily No genes
Cyclic AMP receptor protein No genes
ElaA protein BPHYT_RS08520 N.D.
Heme-regulated cyclic AMP phosphodiesterase (EC 3.1.4.-) No genes
Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase BPHYT_RS12645 +0.1
  BPHYT_RS16305 +0.2
  BPHYT_RS20515 -0.2
  BPHYT_RS32920 -0.2
Predicted signal-transduction protein containing cAMP-binding and CBS domains No genes
Prophage Clp protease-like protein No genes
Purine cyclase-related protein No genes
Putative Heme-regulated two-component response regulator No genes
Putative hemin-binding lipoprotein No genes
Putative insecticidal toxin complex No genes
adenylate cyclase ExoY No genes
anthrax toxin moiety, protective antigen, pagA formerly pag, plasmid pXO1, B. anthracis (M22589, P13423) No genes
bifunctional hemolysin-adenylate cyclase precursor No genes
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases BPHYT_RS04400 -0.2
  BPHYT_RS08490 -0.7
  BPHYT_RS22830 N.D.
  BPHYT_RS30395 -0.5
  BPHYT_RS31300 -0.9
  BPHYT_RS33115 -0.6
cAMP-dependent Kef-type K+ transport system No genes
calmodulin sensitive adenylate cyclase, edema factor, cya, plasmid pXO1, B. anthracis (M23179, M24074) No genes
cyclolysin secretion ATP-binding protein No genes
cyclolysin secretion protein No genes
cyclolysin-activating lysine-acyltransferase No genes
trans-acting positive regulator (Atx A) No genes
transcriptional activator AtxA, (pXO1-119) No genes

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