SEED Subsystem: Protocatechuate branch of beta-ketoadipate pathway in Pseudomonas fluorescens SBW25-INTG

Experiments:

Role Gene Name L-Carnitine (C)  
⨯
3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) PFLU_RS06755 -0.0
  PFLU_RS12375 -0.1
3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) No genes
3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) No genes
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase No genes
4-carboxymuconolactone decarboxylase (EC 4.1.1.44) PFLU_RS04275 -0.1
  PFLU_RS06765 -0.1
Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) PFLU_RS06760 +0.3
  PFLU_RS09135 -0.4
  PFLU_RS11540 +0.1
  PFLU_RS17240 -0.1
  PFLU_RS22225 -0.0
Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) PFLU_RS06735 -0.5
Pca regulon regulatory protein PcaR PFLU_RS06715 +0.2
PhaK-like protein PFLU_RS06785 +0.2
  PFLU_RS19280 +0.3
Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) PFLU_RS06745 +0.4
Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) PFLU_RS06740 -0.3
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) PFLU_RS10585 -2.4
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) PFLU_RS10580 -1.8
dicarboxylic acid transporter PcaT PFLU_RS06750 +0.2

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Or view this subsystem at the SEED (slow)