SEED Subsystem: Homogentisate pathway of aromatic compound degradation in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name Ying_AminoAcid20 rep B; time point 3  
⨯
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) Pf6N2E2_1001 +0.2
  Pf6N2E2_456 -1.5
  Pf6N2E2_5058 -0.3
  Pf6N2E2_988 +0.3
Aromatic-amino-acid aminotransferase (EC 2.6.1.57) No genes
Fumarylacetoacetase (EC 3.7.1.2) Pf6N2E2_5291 -2.4
Homogentisate 1,2-dioxygenase (EC 1.13.11.5) Pf6N2E2_5290 -0.6
Maleylacetoacetate isomerase (EC 5.2.1.2) No genes
Possible 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-) No genes
Transcriptional regulator, IclR family Pf6N2E2_1043 -0.3
  Pf6N2E2_1932 -0.3
  Pf6N2E2_2048 -0.2
  Pf6N2E2_2202 N.D.
  Pf6N2E2_228 +0.1
  Pf6N2E2_5289 +0.2
  Pf6N2E2_855 -0.3
  Pf6N2E2_863 -0.3

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Or view this subsystem at the SEED (slow)