SEED Subsystem: Bacterial Chemotaxis in Pseudomonas stutzeri RCH2

Experiments:

Role Gene Name No vitamins t2  
⨯
Aerotaxis sensor receptor protein Psest_0199 +0.1
  Psest_0201 +0.2
Chemotaxis protein CheC -- inhibitor of MCP methylation Psest_2105 -0.1
Chemotaxis protein CheD No genes
Chemotaxis protein CheV (EC 2.7.3.-) Psest_1842 +0.3
  Psest_2970 +0.9
Chemotaxis protein CheX No genes
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) Psest_2411 +0.1
  Psest_2969 +3.2
  Psest_0301 +0.1
  Psest_0393 +0.7
  Psest_0654 -0.2
  Psest_0783 +0.1
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY Psest_1741 +3.1
  Psest_3850 +1.3
  Psest_0395 +0.1
  Psest_0659 N.D.
Chemotaxis response - phosphatase CheZ Psest_1742 +3.0
Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) Psest_1744 +2.6
  Psest_0303 -0.1
  Psest_0653 N.D.
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) No genes
Flagellar motor switch protein FliG Psest_1720 +4.6
  Psest_4171 +0.0
Flagellar motor switch protein FliM Psest_1729 +4.8
  Psest_4175 +0.0
Flagellar motor switch protein FliN Psest_1730 N.D.
  Psest_4176 N.D.
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) No genes
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Psest_0863 -0.2
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) Psest_1155 +0.3
  Psest_1336 +0.1
  Psest_1372 -0.4
  Psest_2045 +0.2
  Psest_2112 -0.6
  Psest_2233 +1.4
  Psest_2479 +0.1
  Psest_2480 +0.7
  Psest_2676 -0.0
  Psest_0656 +0.2
  Psest_0702 +0.6
  Psest_0727 +0.2
  Psest_0736 +0.0
Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) No genes
Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) No genes
Methyl-accepting chemotaxis protein IV (dipeptide chemoreceptor protein) No genes
Positive regulator of CheA protein activity (CheW) Psest_1749 +3.2
  Psest_0655 -1.5
Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) No genes
Signal transduction histidine kinase CheA (EC 2.7.3.-) Psest_1743 +3.7
  Psest_0657 -0.1

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