SEED Subsystem: Rhamnose containing glycans in Pseudomonas fluorescens FW300-N2E3

Experiments:

Role Gene Name propionate (C)  
⨯
Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase (EC 2.4.1.-) No genes
Alpha-L-Rha alpha-1,2-L-rhamnosyltransferase/alpha-L-Rha alpha-1,3-L- rhamnosyltransferase (EC 2.4.1.-) No genes
Alpha-L-Rha alpha-1,3-L-rhamnosyltransferase (EC 2.4.1.-) AO353_02020 +2.6
Capsular polysaccharide ABC transporter, permease protein KpsM No genes
Capsular polysaccharide biosynthesis/export periplasmic protein WcbA No genes
Capsular polysaccharide export system protein KpsC No genes
DNA for glycosyltransferase, lytic transglycosylase, dTDP-4-rhamnose reductase No genes
Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) AO353_07290 -4.0
  AO353_11880 N.D.
Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39) No genes
Heteropolysaccharide repeat unit export protein No genes
Polysialic acid transport protein KpsM No genes
Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40) AO353_02000 +0.6
  AO353_10260 +1.0
UDP-glucose 4-epimerase (EC 5.1.3.2) AO353_01980 +1.6
  AO353_03260 +0.1
  AO353_06770 N.D.
  AO353_10240 -0.5
  AO353_21135 +0.0
capsular polysaccharide biosynthesis protein AO353_21240 -0.5
dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13) AO353_11875 N.D.
dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) AO353_02030 +0.9
  AO353_06775 -2.7
  AO353_11870 N.D.
dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) AO353_11885 N.D.
putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide No genes
putative polysialic acid transport protein No genes

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