SEED Subsystem: Pentose phosphate pathway in Phocaeicola vulgatus CL09T03C04

Experiments:

Role Gene Name Sucrose 20 mM (C)  
⨯
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) HMPREF1058_RS18025 -0.5
6-phosphogluconolactonase (EC 3.1.1.31) HMPREF1058_RS05475 -0.6
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type HMPREF1058_RS18035 -3.0
Fructose-6-phosphate phosphoketolase (EC 4.1.2.22) No genes
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) HMPREF1058_RS18030 +0.6
Ribose 5-phosphate isomerase A (EC 5.3.1.6) No genes
Ribose 5-phosphate isomerase B (EC 5.3.1.6) HMPREF1058_RS15620 N.D.
Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) HMPREF1058_RS03240 N.D.
Ribulose-phosphate 3-epimerase (EC 5.1.3.1) HMPREF1058_RS07710 N.D.
Transaldolase (EC 2.2.1.2) HMPREF1058_RS03840 +0.2
Transketolase (EC 2.2.1.1) HMPREF1058_RS15625 N.D.
Transketolase, C-terminal section (EC 2.2.1.1) HMPREF1058_RS02705 +0.0
Transketolase, N-terminal section (EC 2.2.1.1) HMPREF1058_RS02710 +0.2
Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9) No genes

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