SEED Subsystem: TCA Cycle in Methanococcus maripaludis JJ

Role	Gene	Name	Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)	No genes
Aconitate hydratase (EC 4.2.1.3)	No genes
Aconitate hydratase 2 (EC 4.2.1.3)	No genes
Aconitate hydratase X, predicted	MMJJ_RS00450		-4.3
Aconitate hydratase large subunit (EC 4.2.1.3)	No genes
Aconitate hydratase small subunit (EC 4.2.1.3)	No genes
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	No genes
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	No genes
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)	No genes
Citrate synthase (si) (EC 2.3.3.1)	No genes
Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	MMJJ_RS07480		+0.3
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4)	No genes
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4)	No genes
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)	No genes
Fumarate hydratase class I (EC 4.2.1.2)	No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2)	No genes
Fumarate hydratase class II (EC 4.2.1.2)	No genes
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42)	No genes
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)	No genes
Malate dehydrogenase (EC 1.1.1.37)	MMJJ_RS01675		-2.0
Malate:quinone oxidoreductase (EC 1.1.5.4)	No genes
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425	No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)	MMJJ_RS07785		-1.4
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)	MMJJ_RS08850		-2.9
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)	MMJJ_RS00185		N.D.
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)	MMJJ_RS08640		N.D.
Transcriptional regulator of succinyl CoA synthetase operon	No genes
hypothetical protein that often co-occurs with aconitase	No genes