SEED Subsystem: Aromatic amino acid degradation in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name L-Phenylalanine (C)  
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.-) No genes
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) Pf6N2E2_1307 -0.0
  Pf6N2E2_1308 +0.2
2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) Pf6N2E2_1313 -0.7
3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC 1.13.11.15) Pf6N2E2_1310 -0.2
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) Pf6N2E2_1001 -0.2
  Pf6N2E2_456 -4.0
  Pf6N2E2_5058 +0.1
  Pf6N2E2_988 -0.0
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) Pf6N2E2_1311 N.D.
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) Pf6N2E2_1309 -0.1
5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) Pf6N2E2_1307 -0.0
  Pf6N2E2_1308 +0.2
  Pf6N2E2_1315 -0.4
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase. Pf6N2E2_1662 +0.1
Anthranilate dioxygenase large subunit No genes
Anthranilate dioxygenase reductase No genes
Anthranilate dioxygenase small subunit No genes
Aromatic amino acid transport protein AroP Pf6N2E2_5632 +0.4
  Pf6N2E2_5633 +0.2
Aromatic ring-opening dioxygenase No genes
Aromatic-L-amino-acid decarboxylase (EC 4.1.1.28) No genes
Homoprotocatechuate degradative operon repressor Pf6N2E2_1305 -0.6
Indoleacetamide hydrolase (EC 3.5.1.-) No genes
Kynurenine formamidase, bacterial (EC 3.5.1.9) No genes
Phenylalanine hydroxylase transcriptional activator PhhR Pf6N2E2_2629 -4.8
Phenylalanine-4-hydroxylase (EC 1.14.16.1) Pf6N2E2_2630 -3.7
Phenylalanine-specific permease No genes
Predicted 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase No genes
Probable 5-carboxymethyl-2-hydroxymuconate delta isomerase Pf6N2E2_2733 N.D.
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase No genes
Putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase oxidoreductase protein (EC 1.2.1.60) No genes
Putative fumarylacetoacetate (FAA) hydrolase Pf6N2E2_229 -0.0
Tryptophan 2,3-dioxygenase (EC 1.13.11.11) No genes
Tryptophan 2-monooxygenase (EC 1.13.12.3) No genes
Tryptophanase (EC 4.1.99.1) No genes

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