SEED Subsystem: Inositol catabolism in Pseudomonas fluorescens FW300-N1B4

Experiments:

Role Gene Name L-Arabinose (C)  
⨯
5-deoxy-glucuronate isomerase (EC 5.3.1.-) Pf1N1B4_4276 +0.2
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) No genes
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase [form 2] (EC 4.1.2.29) No genes
5-keto-2-deoxygluconokinase (EC 2.7.1.92) Pf1N1B4_4274 +0.2
Epi-inositol hydrolase (EC 3.7.1.-) Pf1N1B4_4279 +0.2
Fe-containing alcohol dehydrogenase No genes
Glyceraldehyde-3-phosphate ketol-isomerase (EC 5.3.1.1) Pf1N1B4_4281 +0.4
Inositol oxygenase (EC 1.13.99.1) No genes
Inositol transport system ATP-binding protein Pf1N1B4_4286 -0.5
Inositol transport system permease protein Pf1N1B4_4287 +0.0
Inositol transport system sugar-binding protein Pf1N1B4_4285 -0.3
  Pf1N1B4_4386 -0.0
Inosose dehydratase (EC 4.2.1.44) Pf1N1B4_4275 +0.1
Inosose isomerase (EC 5.3.99.-) Pf1N1B4_4097 -0.1
  Pf1N1B4_4278 N.D.
Major myo-inositol transporter IolT No genes
Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) Pf1N1B4_4277 +0.3
Minor myo-inositol transporter IolF No genes
Myo-inositol 2-dehydrogenase (EC 1.1.1.18) Pf1N1B4_4280 -0.0
  Pf1N1B4_4282 -0.3
  Pf1N1B4_4388 +0.1
  Pf1N1B4_4526 +0.1
Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18) No genes
Myo-inositol 2-dehydrogenase 2 (EC 1.1.1.18) No genes
Predicted transcriptional regulator of the myo-inositol catabolic operon Pf1N1B4_4273 +1.5
Sodium/myo-inositol cotransporter No genes
Transcriptional repressor of the myo-inositol catabolic operon DeoR family No genes
uncharacterized domain Pf1N1B4_4274 +0.2

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