SEED Subsystem: n-Phenylalkanoic acid degradation in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name L-Phenylalanine (C)  
⨯
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) BPHYT_RS03225 -0.0
  BPHYT_RS06760 -1.3
  BPHYT_RS09560 -0.2
  BPHYT_RS13545 -2.1
  BPHYT_RS34155 +0.5
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) BPHYT_RS09560 -0.2
  BPHYT_RS13545 -2.1
3-ketoacyl-CoA thiolase (EC 2.3.1.16) BPHYT_RS02230 +0.1
  BPHYT_RS09565 +0.8
Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) BPHYT_RS09560 -0.2
  BPHYT_RS13545 -2.1
Enoyl-CoA hydratase (EC 4.2.1.17) BPHYT_RS02345 -0.1
  BPHYT_RS03225 -0.0
  BPHYT_RS03235 +0.3
  BPHYT_RS03825 N.D.
  BPHYT_RS08375 N.D.
  BPHYT_RS08630 -0.0
  BPHYT_RS09560 -0.2
  BPHYT_RS10815 N.D.
  BPHYT_RS11780 N.D.
  BPHYT_RS13545 -2.1
  BPHYT_RS14830 +0.1
  BPHYT_RS25360 N.D.
  BPHYT_RS25695 N.D.
  BPHYT_RS27105 +0.1
  BPHYT_RS27895 -0.4
  BPHYT_RS28620 -0.5
  BPHYT_RS35465 -0.1
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) BPHYT_RS08270 +0.2
  BPHYT_RS19375 -0.0
Putative 3-hydroxyacyl-coa dehydrogenase No genes
enoyl-CoA hydratase, R-specific No genes

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