SEED Subsystem: Oxidative stress in Dechlorosoma suillum PS

Experiments:

Role Gene Name rich media with hydrogen peroxide 5 mM  
⨯
Alkyl hydroperoxide reductase subunit C-like protein Dsui_1253 -0.0
  Dsui_2873 -0.2
Catalase (EC 1.11.1.6) Dsui_2233 +0.1
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins No genes
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR Dsui_3068 N.D.
Ferroxidase (EC 1.16.3.1) Dsui_0822 -2.7
Fumarate and nitrate reduction regulatory protein No genes
Heme oxygenase HemO, associated with heme uptake No genes
Hydrogen peroxide-inducible genes activator Dsui_0224 -0.1
  Dsui_0823 -0.0
  Dsui_3419 +0.5
Iron-binding ferritin-like antioxidant protein Dsui_0822 -2.7
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) No genes
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR No genes
NnrS protein involved in response to NO Dsui_1643 +0.1
  Dsui_2207 -0.1
Non-specific DNA-binding protein Dps Dsui_0822 -2.7
Organic hydroperoxide resistance protein Dsui_2173 N.D.
Organic hydroperoxide resistance transcriptional regulator Dsui_2172 +0.2
Paraquat-inducible protein A Dsui_2290 +0.2
  Dsui_2291 N.D.
Paraquat-inducible protein B Dsui_2289 -0.5
Peroxidase (EC 1.11.1.7) Dsui_2233 +0.1
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) Dsui_1549 -0.1
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR No genes
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS No genes
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) No genes
Superoxide dismutase [Fe] (EC 1.15.1.1) Dsui_3269 N.D.
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) No genes
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR Dsui_0590 N.D.
bacteriophytochrome heme oxygenase BphO No genes
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family Dsui_0043 +0.1
  Dsui_1107 -0.2
transcriptional regulator, Fur family No genes

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