SEED Subsystem: Polyhydroxybutyrate metabolism in Pseudomonas stutzeri RCH2

Experiments:

Role Gene Name L-tyrosine  
⨯
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Psest_2654 N.D.
  Psest_3800 +0.7
  Psest_3969 +0.4
  Psest_4235 +0.0
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) No genes
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) No genes
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Psest_2654 N.D.
  Psest_3969 +0.4
  Psest_4235 +0.0
3-ketoacyl-CoA thiolase (EC 2.3.1.16) No genes
Acetoacetyl-CoA reductase (EC 1.1.1.36) No genes
Acetoacetyl-CoA synthetase (EC 6.2.1.16) Psest_1086 +0.0
  Psest_2477 +0.3
Acetyl-CoA acetyltransferase (EC 2.3.1.9) Psest_1076 -1.5
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) No genes
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) No genes
D(-)-3-hydroxybutyrate oligomer hydrolase (EC 3.1.1.22) No genes
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) Psest_3522 -0.3
D-beta-hydroxybutyrate permease Psest_3521 +0.6
Enoyl-CoA hydratase (EC 4.2.1.17) Psest_2654 N.D.
  Psest_3969 +0.4
  Psest_4235 +0.0
Intracellular PHB depolymerase (EC 3.1.1.-) No genes
Poly(3-hydroxyalkanoate) depolymerase No genes
Polyhydroxyalkanoate granule-associated protein PhaF No genes
Polyhydroxyalkanoic acid synthase No genes
Putative 3-hydroxyacyl-coa dehydrogenase No genes
Short chain fatty acids transporter Psest_3520 -0.1
  Psest_3526 -0.1
polyhydroxyalkanoate granule-associated protein PhaI No genes
polyhydroxyalkanoate synthesis repressor PhaR No genes

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