SEED Subsystem: Isobutyryl-CoA to Propionyl-CoA Module in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name Parafilmed volatile agar plate with Trichoderma atroviridae IMI  
⨯
3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35) No genes
3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) BPHYT_RS11485 -0.3
  BPHYT_RS25645 -0.3
  BPHYT_RS28025 +0.4
  BPHYT_RS29415 N.D.
3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) BPHYT_RS28015 -0.1
3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) No genes
Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) No genes
Butyryl-CoA dehydrogenase (EC 1.3.99.2) BPHYT_RS00670 +0.3
  BPHYT_RS02220 -0.3
  BPHYT_RS08290 +0.1
  BPHYT_RS20325 +0.2
  BPHYT_RS25370 +0.2
  BPHYT_RS25400 +2.8
  BPHYT_RS28040 -0.3
Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) BPHYT_RS28020 N.D.
Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) BPHYT_RS28020 N.D.
Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) BPHYT_RS19500 +0.2
  BPHYT_RS21100 N.D.
  BPHYT_RS28030 +0.1
  BPHYT_RS28150 -0.0
  BPHYT_RS28825 +0.3

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