SEED Subsystem: Phosphate metabolism in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days  
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1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) BPHYT_RS03335 N.D.
  BPHYT_RS04250 -0.6
  BPHYT_RS28275 -0.7
Alkaline phosphatase (EC 3.1.3.1) BPHYT_RS21320 -0.2
Alkaline phosphatase like protein BPHYT_RS34375 -0.2
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP No genes
Apolipoprotein N-acyltransferase (EC 2.3.1.-) BPHYT_RS16560 N.D.
Distant similarity with phosphate transport system regulator No genes
Exopolyphosphatase (EC 3.6.1.11) BPHYT_RS14105 -1.5
FIG000233: metal-dependent hydrolase No genes
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (EC 3.6.1.40) No genes
Inorganic pyrophospatase PpaX (EC 3.1.3.18) No genes
Inorganic pyrophosphatase (EC 3.6.1.1) BPHYT_RS05375 N.D.
Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) BPHYT_RS15440 N.D.
Low-affinity inorganic phosphate transporter BPHYT_RS21380 -0.3
Magnesium and cobalt efflux protein CorC BPHYT_RS16555 -1.0
  BPHYT_RS17140 -0.1
  BPHYT_RS33815 -0.2
Manganese-dependent inorganic pyrophosphatase (EC 3.6.1.1) No genes
NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) BPHYT_RS03370 -0.4
  BPHYT_RS03375 -0.0
  BPHYT_RS21150 +1.6
  BPHYT_RS21155 +0.2
NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) BPHYT_RS03380 +0.4
  BPHYT_RS21160 -0.1
  BPHYT_RS29900 N.D.
Na/Pi cotransporter II-related protein No genes
Phosphatase, Ppx/GppA family No genes
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) BPHYT_RS14145 -1.3
  BPHYT_RS33390 +0.1
  BPHYT_RS33405 +0.0
Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) BPHYT_RS14115 -4.9
Phosphate regulon transcriptional regulatory protein PhoB (SphR) BPHYT_RS14120 -7.2
Phosphate starvation-inducible ATPase PhoH with RNA binding motif No genes
Phosphate starvation-inducible protein PhoH, predicted ATPase BPHYT_RS11245 +0.4
  BPHYT_RS16540 +0.1
Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) BPHYT_RS14130 -5.9
Phosphate transport regulator (distant homolog of PhoU) BPHYT_RS08880 +0.1
Phosphate transport system permease protein PstA (TC 3.A.1.7.1) BPHYT_RS14135 -1.9
Phosphate transport system permease protein PstC (TC 3.A.1.7.1) BPHYT_RS14140 -1.3
Phosphate transport system regulatory protein PhoU BPHYT_RS14125 -2.9
Phosphate-specific outer membrane porin OprP No genes
Polyphosphate kinase (EC 2.7.4.1) BPHYT_RS14110 -0.2
Predicted ATPase related to phosphate starvation-inducible protein PhoH BPHYT_RS08900 -0.7
Probable low-affinity inorganic phosphate transporter BPHYT_RS08885 +0.4
Putative periplasmic phosphate-binding protein PstS (Mycoplasma type) No genes
Pyrophosphate-energized proton pump (EC 3.6.1.1) No genes
Pyrophosphate-specific outer membrane porin OprO No genes
Sodium-dependent phosphate transporter BPHYT_RS02475 +0.1
Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) No genes
putative alkaline phosphatase-like protein No genes
response regulator in two-component regulatory system with PhoQ No genes
secreted alkaline phosphatase No genes

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