SEED Subsystem: Flagellar motility in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days  
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Chemotaxis protein CheV (EC 2.7.3.-) BPHYT_RS07045 +0.5
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY BPHYT_RS12845 -6.9
  BPHYT_RS18965 -4.4
  BPHYT_RS19005 -3.1
  BPHYT_RS24295 N.D.
  BPHYT_RS26770 -1.0
  BPHYT_RS34550 N.D.
  BPHYT_RS35960 +0.2
Flagellar L-ring protein FlgH BPHYT_RS17815 -0.1
  BPHYT_RS18865 -1.7
Flagellar basal-body rod modification protein FlgD BPHYT_RS18885 -1.9
Flagellar biosynthesis protein FlhA BPHYT_RS18940 -1.4
  BPHYT_RS25875 +0.7
Flagellar biosynthesis protein FlhB BPHYT_RS18750 +0.2
  BPHYT_RS18945 -1.5
  BPHYT_RS25880 N.D.
Flagellar biosynthesis protein FlhF BPHYT_RS18935 -1.8
Flagellar biosynthesis protein FliR BPHYT_RS18835 +0.4
  BPHYT_RS25885 +0.3
Flagellar motor rotation protein MotA BPHYT_RS19015 -1.3
  BPHYT_RS22835 -0.7
  BPHYT_RS29670 -0.7
Flagellar motor rotation protein MotB BPHYT_RS19010 -1.2
  BPHYT_RS22840 -0.2
  BPHYT_RS29675 -0.2
Flagellar motor switch protein FliM BPHYT_RS18810 -1.1
Flagellar motor switch protein FliN BPHYT_RS18815 N.D.
Flagellar synthesis regulator FleN BPHYT_RS18930 -1.7
Flagellin No genes
Flagellum-specific ATP synthase FliI BPHYT_RS18790 -2.0
  BPHYT_RS25870 +1.1
Motility accessory factor No genes
Motility integral membrane protein No genes
Predicted signal transduction protein BPHYT_RS07750 -0.2
  BPHYT_RS07760 +0.0
Putative lipoprotein required for motility No genes
RNA polymerase sigma factor for flagellar operon BPHYT_RS18925 -2.3
RNA polymerase sigma-54 factor RpoN BPHYT_RS02905 -0.8
  BPHYT_RS08240 +0.3
  BPHYT_RS24740 -0.1
  BPHYT_RS27005 -0.4
Rrf2 family transcriptional regulator No genes
Signal transduction histidine kinase CheA (EC 2.7.3.-) BPHYT_RS08330 -0.1
  BPHYT_RS12005 +0.0
  BPHYT_RS19000 -2.8
  BPHYT_RS34565 -0.7
  BPHYT_RS34570 -0.6
Signal transduction protein CetA, mediates an energy taxis response No genes
Signal transduction protein CetB, mediates an energy taxis response No genes

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