SEED Subsystem: Denitrification in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name Nitrate reduction, replicate A  
⨯
Copper-containing nitrite reductase (EC 1.7.2.1) No genes
Cytochrome cd1 nitrite reductase (EC:1.7.2.1) Pf6N2E2_705 -0.5
Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) Pf6N2E2_713 +0.0
  Pf6N2E2_724 +0.6
Nitric oxide -responding transcriptional regulator NnrR (Crp/Fnr family) No genes
Nitric oxide reductase activation protein NorD Pf6N2E2_711 -2.3
Nitric oxide reductase activation protein NorE Pf6N2E2_707 -1.0
Nitric oxide reductase activation protein NorQ Pf6N2E2_706 -2.5
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent Pf6N2E2_1250 -0.0
Nitric-oxide reductase subunit B (EC 1.7.99.7) Pf6N2E2_710 -1.9
Nitric-oxide reductase subunit C (EC 1.7.99.7) Pf6N2E2_709 -2.4
Nitrite reductase accessory protein NirV No genes
Nitrous oxide reductase maturation periplasmic protein NosX No genes
Nitrous oxide reductase maturation protein NosD Pf6N2E2_1406 -0.1
Nitrous oxide reductase maturation protein NosF (ATPase) Pf6N2E2_1405 +0.1
Nitrous oxide reductase maturation protein NosR Pf6N2E2_1408 +0.0
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL Pf6N2E2_1403 -0.0
Nitrous oxide reductase maturation transmembrane protein NosY Pf6N2E2_1404 +0.3
Nitrous-oxide reductase (EC 1.7.99.6) Pf6N2E2_1407 -0.0
NnrS protein involved in response to NO Pf6N2E2_714 -0.8
NnrT family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) No genes
NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) No genes

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