SEED Subsystem: Homogentisate pathway of aromatic compound degradation in Klebsiella michiganensis M5al

Experiments:

Role Gene Name rhizosphere EcoFAB sample 3; outgrowth in LB  
⨯
4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) BWI76_RS04635 -1.3
  BWI76_RS16940 +0.2
  BWI76_RS16945 +0.1
Aromatic-amino-acid aminotransferase (EC 2.6.1.57) No genes
Fumarylacetoacetase (EC 3.7.1.2) BWI76_RS19580 -1.0
Homogentisate 1,2-dioxygenase (EC 1.13.11.5) No genes
Maleylacetoacetate isomerase (EC 5.2.1.2) No genes
Possible 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-) No genes
Transcriptional regulator, IclR family BWI76_RS06465 +0.8
  BWI76_RS27075 +1.9

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