SEED Subsystem: Beta-Glucoside Metabolism in Klebsiella michiganensis M5al

Experiments:

Role Gene Name rhizosphere EcoFAB sample 3; outgrowth in LB  
6-phospho-beta-glucosidase (EC 3.2.1.86) BWI76_RS02950 -0.0
  BWI76_RS07295 +0.3
  BWI76_RS09020 +0.7
  BWI76_RS16340 -0.5
  BWI76_RS19550 +0.1
  BWI76_RS20955 +0.1
  BWI76_RS23855 -0.2
6-phospho-beta-glucosidase ascB (EC 3.2.1.86) BWI76_RS22295 -0.0
AscBF operon repressor BWI76_RS22285 -0.7
  BWI76_RS22420 -5.7
Beta-glucanase precursor (EC 3.2.1.73) No genes
Beta-glucosidase (EC 3.2.1.21) BWI76_RS11890 +0.0
  BWI76_RS17685 -0.2
  BWI76_RS22380 -0.1
  BWI76_RS23345 -0.1
Beta-glucoside ABC transport system, ATP-binding protein 1 No genes
Beta-glucoside ABC transport system, ATP-binding protein 2 No genes
Beta-glucoside ABC transport system, permease protein 1 No genes
Beta-glucoside ABC transport system, permease protein 2 No genes
Beta-glucoside ABC transport system, sugar-binding protein No genes
Beta-glucoside bgl operon antiterminator, BglG family BWI76_RS07300 +0.4
  BWI76_RS19560 +0.3
Cellobiose phosphorylase (EC 2.4.1.-) No genes
Cellobiose phosphotransferase system YdjC-like protein BWI76_RS11750 +0.3
Cellobiose-responsive regulator of beta-glucosides utilization, ROK family No genes
Cytoplasmic endo-1,4-beta-glucanase (EC 3.2.1.4) No genes
Endo-beta-1,3-1,4 glucanase (Licheninase) (EC 3.2.1.73) No genes
Extracellular endo-1,4-beta-glucanase (EC 3.2.1.4) No genes
Glucokinase, ROK family (EC 2.7.1.2) No genes
Glucose ABC transporter, ATP-binding component No genes
Glucose ABC transporter, permease component No genes
Glucose ABC transporter, substrate-binding component No genes
Laminarinase (EC 3.2.1.39) No genes
Methyl-accepting chemotaxis protein co-located with beta-glucan transporter system No genes
Negative transcriptional regulator of cel operon No genes
Outer surface protein of unknown function, cellobiose operon No genes
PTS system, arbutin-, cellobiose-, and salicin-specific IIBC component (EC 2.7.1.69) BWI76_RS22290 +0.4
PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) BWI76_RS07290 +0.4
  BWI76_RS19555 -0.6
PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) BWI76_RS07290 +0.4
  BWI76_RS19555 -0.6
PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) BWI76_RS07290 +0.4
  BWI76_RS19555 -0.6
PTS system, cellobiose-specific IIA component (EC 2.7.1.69) BWI76_RS11735 -0.1
  BWI76_RS22410 +0.7
  BWI76_RS27755 -1.1
PTS system, cellobiose-specific IIB component (EC 2.7.1.69) BWI76_RS01520 +0.5
  BWI76_RS02945 N.D.
  BWI76_RS12655 -1.6
  BWI76_RS22400 N.D.
  BWI76_RS27745 +0.3
PTS system, cellobiose-specific IIC component (EC 2.7.1.69) BWI76_RS04045 -0.6
  BWI76_RS14945 -0.2
  BWI76_RS22395 -0.4
  BWI76_RS22405 -0.1
  BWI76_RS23350 -0.3
  BWI76_RS27750 -0.4
PTS system, diacetylchitobiose-specific IIA component (EC 2.7.1.6 No genes
PTS system, diacetylchitobiose-specific IIB component (EC 2.7.1.69) No genes
PTS system, diacetylchitobiose-specific IIC component (EC 2.7.1.69) No genes
Periplasmic beta-glucosidase (EC 3.2.1.21) BWI76_RS19510 +0.1
Predicted aldo/keto reductase in CelR regulon, COG4989 No genes
Predicted beta-glucoside specific TonB-dependent outer membrane receptor No genes
Predicted beta-glucoside transporter, GPH family BWI76_RS00630 -0.5
  BWI76_RS11885 -0.4
  BWI76_RS17695 -1.3
Predicted beta-glucoside-regulated ABC transport system, permease component 1, COG1175 No genes
Predicted beta-glucoside-regulated ABC transport system, permease component 2, COG0395 No genes
Predicted beta-glucoside-regulated ABC transport system, sugar binding component, COG1653 No genes
Predicted beta-glucosides ABC transporter, permease protein 1 No genes
Predicted beta-glucosides ABC transporter, permease protein 2 No genes
Predicted beta-glucosides ABC transporter, substrate binding prot No genes
Predicted cellobiose ABC transport system, ATP-binding protein 1 No genes
Predicted cellobiose ABC transport system, ATP-binding protein 2 No genes
Predicted cellobiose ABC transport system, permease protein 1 No genes
Predicted cellobiose ABC transport system, permease protein 2 No genes
Predicted cellobiose ABC transport system, sugar-binding protein No genes
Predicted dehydrogenase in CelR regulon, COG0673 No genes
Predicted glucose transporter in beta-glucoside utilization gene cluster No genes
Predicted regulator Pmob_1925 of beta-glucosides utilization, ROK family No genes
Predicted regulator of cellobiose and glucan utilization, LacI family No genes
Predicted regulator of glucose and trehalose utilization, ROK family No genes
Transcriptional antiterminator of lichenan operon, BglG family BWI76_RS27585 -1.0
Transcriptional regulator of beta-glucosides utilization, LacI family No genes

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