SEED Subsystem: Methionine Biosynthesis in Pseudomonas stutzeri RCH2

Experiments:

Role Gene Name RCH2 grown on a colony of N2F3  
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Psest_0313 +2.1
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) Psest_2102 +1.6
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) Psest_1452 +0.1
Adenosylhomocysteinase (EC 3.3.1.1) Psest_0314 N.D.
Archaeal S-adenosylmethionine synthetase (EC 2.5.1.6) No genes
Betaine--homocysteine S-methyltransferase (EC 2.1.1.5) No genes
Cystathionine beta-lyase (EC 4.4.1.8) No genes
Cystathionine beta-lyase, type II (EC 4.4.1.8) No genes
Cystathionine beta-synthase (EC 4.2.1.22) No genes
Cystathionine gamma-lyase (EC 4.4.1.1) No genes
Cystathionine gamma-synthase (EC 2.5.1.48) No genes
Cysteine synthase (EC 2.5.1.47) Psest_1855 -0.4
Duplicated ATPase component MtsB of energizing module of methionine-regulated ECF transporter No genes
Homocysteine S-methyltransferase (EC 2.1.1.10) No genes
Homoserine O-acetyltransferase (EC 2.3.1.31) Psest_2366 -0.3
  Psest_0280 -0.2
Homoserine O-succinyltransferase (EC 2.3.1.46) No genes
Homoserine dehydrogenase (EC 1.1.1.3) Psest_2136 -1.4
  Psest_3126 N.D.
Homoserine kinase (EC 2.7.1.39) Psest_2327 -0.2
  Psest_4221 +0.2
Methionine ABC transporter ATP-binding protein Psest_1362 N.D.
  Psest_4314 +0.8
Methionine ABC transporter permease protein Psest_4315 +2.3
Methionine ABC transporter substrate-binding protein Psest_4316 +0.8
Methionine repressor MetJ No genes
Methionine synthase activation domain (EC 2.1.1.13) No genes
Methionine transporter MetT No genes
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) Psest_2578 -0.1
  Psest_3685 -0.0
O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) Psest_2578 -0.1
  Psest_3685 -0.0
Predicted regulator of methionine metabolism, ArsR family No genes
S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) No genes
S-adenosylmethionine synthetase (EC 2.5.1.6) Psest_0323 N.D.
S-ribosylhomocysteine lyase (EC 4.4.1.21) No genes
SAM-dependent methlytransferase UbiG No genes
SAM-dependent methlytransferase YrrT No genes
Serine acetyltransferase (EC 2.3.1.30) Psest_1249 +0.4
  Psest_1267 -0.0
Substrate-specific component MtsA of methionine-regulated ECF transporter No genes
Transcriptional activator MetR Psest_1450 N.D.
Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter No genes

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