SEED Subsystem: Protein degradation in Phocaeicola vulgatus CL09T03C04

Experiments:

Role Gene Name pyrophosphate 1 mM phosphorus source  
⨯
Aminopeptidase C (EC 3.4.22.40) HMPREF1058_RS04350 -0.1
  HMPREF1058_RS06275 +0.3
  HMPREF1058_RS14840 +0.2
Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) No genes
Arginine-tRNA-protein transferase (EC 2.3.2.8) No genes
Asp-X dipeptidase No genes
Deblocking aminopeptidase (EC 3.4.11.-) No genes
Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) HMPREF1058_RS03645 -0.2
  HMPREF1058_RS10480 -0.3
  HMPREF1058_RS17165 +2.5
Isoaspartyl dipeptidase (EC 3.4.19.5) No genes
Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) HMPREF1058_RS09045 -0.3
Nondeblocking aminopeptidase YpdE (X-X-[^PR]- specific) No genes
Oligopeptidase A (EC 3.4.24.70) No genes
Thimet oligopeptidase (EC 3.4.24.15) No genes

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