SEED Subsystem: L-fucose utilization in Phocaeicola vulgatus CL09T03C04

Experiments:

Role Gene Name beta-Cyclodextrin 2.5 mg/ml (C)  
⨯
Alpha-L-fucosidase (EC 3.2.1.51) HMPREF1058_RS00285 +0.1
  HMPREF1058_RS06995 -0.2
  HMPREF1058_RS08070 +0.5
  HMPREF1058_RS10750 -0.1
  HMPREF1058_RS11680 +0.3
  HMPREF1058_RS13265 +0.1
Fucose permease HMPREF1058_RS00305 +0.1
  HMPREF1058_RS12270 +0.1
  HMPREF1058_RS17065 +1.2
L-fucose isomerase (EC 5.3.1.25) HMPREF1058_RS12275 -0.2
L-fucose mutarotase No genes
L-fucose operon activator No genes
L-fuculokinase (EC 2.7.1.51) No genes
L-fuculose phosphate aldolase (EC 4.1.2.17) No genes
Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22) No genes
Lactaldehyde reductase (EC 1.1.1.77) HMPREF1058_RS00185 +0.6
  HMPREF1058_RS11705 +0.2
Possible alternative L-fucose mutarotase No genes
Possible fucose ABC transporter, substrate-binding component No genes
Predicted L-fucose-specific phosphotransferase system, EIIA component No genes
Predicted L-fucose-specific phosphotransferase system, EIIB component No genes
Predicted L-fucose-specific phosphotransferase system, EIIC component No genes
Predicted L-fucose-specific phosphotransferase system, EIID component No genes
Transcriptional regulator of fucose utilization, GntR family HMPREF1058_RS12280 -0.4

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