SEED Subsystem: Pyrimidine utilization in Klebsiella michiganensis M5al

Experiments:

Role Gene Name RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x  
⨯
Beta-ureidopropionase (EC 3.5.1.6) BWI76_RS07250 N.D.
  BWI76_RS07550 -0.1
Dihydropyrimidinase (EC 3.5.2.2) No genes
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) No genes
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway BWI76_RS10765 +0.2
Possible pyrimidine permease in reductive pathway No genes
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway BWI76_RS10775 +0.0
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway BWI76_RS10755 -0.4
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway BWI76_RS10780 -0.9
Predicted reductase RutE in novel pyrimidine catabolism pathway BWI76_RS10760 +0.2
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism No genes
Pyrimidine ABC transporter, ATP-binding protein No genes
Pyrimidine ABC transporter, substrate-binding component No genes
Pyrimidine ABC transporter, transmembrane component 1 No genes
Pyrimidine ABC transporter, transmembrane component 2 No genes
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) BWI76_RS10785 +0.2
  BWI76_RS27680 -1.5
Uracil permease BWI76_RS10750 -0.1
  BWI76_RS20940 -0.2

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Or view this subsystem at the SEED (slow)