SEED Subsystem: Pyrimidine utilization in Pseudomonas fluorescens FW300-N1B4

Experiments:

Role Gene Name carbon source Sucrose 5mM  
⨯
Beta-ureidopropionase (EC 3.5.1.6) Pf1N1B4_4519 N.D.
Dihydropyrimidinase (EC 3.5.2.2) Pf1N1B4_4517 -0.5
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) Pf1N1B4_4515 +0.4
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway No genes
Possible pyrimidine permease in reductive pathway Pf1N1B4_4518 +0.2
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway No genes
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway Pf1N1B4_1212 +1.8
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway No genes
Predicted reductase RutE in novel pyrimidine catabolism pathway No genes
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Pf1N1B4_4516 +0.2
Pyrimidine ABC transporter, ATP-binding protein No genes
Pyrimidine ABC transporter, substrate-binding component No genes
Pyrimidine ABC transporter, transmembrane component 1 No genes
Pyrimidine ABC transporter, transmembrane component 2 No genes
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) Pf1N1B4_1241 -0.0
  Pf1N1B4_4514 -0.3
Uracil permease Pf1N1B4_2933 +0.2

Or select organism:

Or view this subsystem at the SEED (slow)