SEED Subsystem: ZZ gjo need homes in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name RCH2 defined with Nickel (II) chloride 0.04 mM  
AMP/CMP kinase AK6 No genes
Cephalosporin hydroxylase Pf6N2E2_2613 -0.0
Cob(I)alamin adenosyltransferase fragment No genes
GTP-binding protein RBG1 No genes
GTP-binding protein, gtp1/obg family No genes
Hydroxylamine oxidoreductase precursor (EC 1.7.3.4) No genes
Lipid A export ATP-binding/permease protein MsbA Pf6N2E2_2295 -0.2
  Pf6N2E2_2531 +0.3
  Pf6N2E2_2685 -0.3
  Pf6N2E2_3657 N.D.
LysR family transcriptional regulator clustered with dicarboxylate transport No genes
MFS superfamily export protein YceL No genes
Microcompartment protein protein similar to PduA/PduJ No genes
Mitochondrial processing peptidase-like protein (EC 3.4.24.64) No genes
Na+/H+ antiporter Pf6N2E2_3075 +0.0
Na+/H+ antiporter NhaB Pf6N2E2_760 -2.2
Peptidyl-tRNA hydrolase, archaeal type (EC 3.1.1.29) No genes
Phage-encoded chromosome degrading nuclease YokF No genes
Phosphatidyl-N-methylethanolamine N-methyltransferase (EC 2.1.1.71) No genes
Phosphatidylcholine synthase (EC 2.7.8.24) No genes
Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated No genes
Pole remodelling regulatory diguanylate cyclase No genes
Proposed peptidoglycan lipid II flippase MurJ Pf6N2E2_5107 N.D.
Protein of unknown function DUF81 Pf6N2E2_3944 +1.7
Protein of unknown function DUF81, type 2 No genes
Protein of unknown function YceH No genes
Protein secretion chaperonin CsaA No genes
Proton/aspartate symport protein No genes
Proton/glutamate symport protein No genes
Putative GTP-binding protien TM0445 No genes
Putative heat shock protein YegD Pf6N2E2_3559 -0.5
Putative membrane protein YfcA No genes
Putative permease PerM (= YfgO) Pf6N2E2_2750 -0.6
Putative permease often clustered with de novo purine synthesis Pf6N2E2_5731 +0.2
Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) No genes
Quinone oxidoreductase (EC 1.6.5.5) Pf6N2E2_1056 +0.7
  Pf6N2E2_1730 -0.3
  Pf6N2E2_4127 +0.0
  Pf6N2E2_4469 -0.3
RNase L inhibitor No genes
Sodium/glutamate symport protein Pf6N2E2_4368 -0.0
Transcription accessory protein (S1 RNA-binding domain) Pf6N2E2_3906 -0.4
Tyrosine-specific transport protein No genes
Uncharacterized ATP-dependent helicase MJ0294 No genes
Virulence factor MviM No genes

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