SEED Subsystem: Siderophore Pyoverdine in Pseudomonas fluorescens SBW25-INTG

Experiments:

Role Gene Name p-Coumaric (C) and Ammonium chloride (N); with TAPS  
ABC transporter in pyoverdin gene cluster, ATP-binding component PFLU_RS10035 -0.2
ABC transporter in pyoverdin gene cluster, periplasmic component PFLU_RS10025 -0.0
ABC transporter in pyoverdin gene cluster, permease component PFLU_RS10030 +0.2
Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching No genes
Antisigma transmembrane sensor FpvR No genes
Cation ABC transporter, periplasmic cation-binding protein, PA2407 homolog PFLU_RS10040 -0.0
Hypothetical MbtH-like protein, PA2412 homolog No genes
Hypothetical protein PvdX No genes
Hypothetical protein PvdY No genes
Hypothetical protein in pyoverdin gene cluster No genes
Hypothetical protein in pyoverdin gene cluster, PA2405 homolog No genes
Hypothetical protein in pyoverdin gene cluster, PA2406 homolog No genes
L-ornithine 5-monooxygenase (EC 1.13.12.-), PvdA of pyoverdin biosynthesis PFLU_RS19415 +0.2
Non-ribosomal peptide synthetase modules, pyoverdine PFLU_RS12435 -0.2
Non-ribosomal peptide synthetase modules, pyoverdine?? PFLU_RS12480 -1.9
  PFLU_RS12485 -1.4
Outer membrane ferripyoverdine receptor PFLU_RS16480 +0.1
  PFLU_RS17715 +0.1
Outer membrane ferripyoverdine receptor FpvA, TonB-dependent PFLU_RS28540 +0.1
Outer membrane ferripyoverdine receptor FpvB, for Type I pyoverdine No genes
Outer membrane porin, coexpressed with pyoverdine biosynthesis regulon PFLU_RS04755 +0.2
Outer membrane pyoverdine eflux protein PFLU_RS19435 -0.1
Pirin-related protein, coexpressed with pyoverdine biosynthesis regulon No genes
Probable hydrolase, coexpressed with pyoverdine biosynthesis regulon No genes
Probable thioesterase involved in non-ribosomal peptide biosynthesis, PA2411 homolog No genes
Putative dipeptidase, pyoverdin biosynthesis PvdM PFLU_RS12470 +0.4
Putative iron-regulated membrane protein, PA2403 homolog No genes
Putative thiamine pyrophosphate-requiring enzyme, PA2404 homolog No genes
PvdE, pyoverdine ABC export system, fused ATPase and permease components PFLU_RS12450 -1.1
PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV) PFLU_RS12460 -0.2
Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76) PFLU_RS21470 -0.5
Pyoverdin biosynthesis protein PvdN, putative aminotransferase, class V PFLU_RS12465 -0.1
Pyoverdine biosynthesis related protein PvdP PFLU_RS12475 +0.1
Pyoverdine chromophore precursor synthetase PvdL No genes
Pyoverdine efflux carrier and ATP binding protein PFLU_RS19430 -0.2
Pyoverdine sidechain non-ribosomal peptide synthetase PvdD PFLU_RS12440 +0.3
Pyoverdine sidechain non-ribosomal peptide synthetase PvdI No genes
Pyoverdine sidechain non-ribosomal peptide synthetase PvdJ No genes
Pyoverdine synthetase PvdF, N5-hydroxyornithine formyltransferase PFLU_RS12455 -0.6
Sigma factor PvdS, controling pyoverdin biosynthesis PFLU_RS21525 -0.2
Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis No genes
Thioesterase PvdG involved in non-ribosomal peptide biosynthesis No genes
pyoverdine-specific efflux macA-like protein PFLU_RS19425 +0.5

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