SEED Subsystem: Isoleucine degradation in Pseudomonas stutzeri RCH2

Experiments:

Role Gene Name Bacitracin 0.25 mg/ml  
⨯
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Psest_2654 N.D.
  Psest_3800 -0.0
  Psest_3969 -0.4
  Psest_4235 -0.0
3-ketoacyl-CoA thiolase (EC 2.3.1.16) No genes
3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) No genes
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) No genes
Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) No genes
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4) No genes
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) No genes
Branched-chain amino acid aminotransferase (EC 2.6.1.42) Psest_0450 +1.7
Butyrate kinase (EC 2.7.2.7) No genes
Butyryl-CoA dehydrogenase (EC 1.3.99.2) Psest_2440 -0.0
  Psest_2445 -0.3
  Psest_2475 +0.4
  Psest_2728 -0.3
  Psest_4233 -0.1
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) No genes
Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4) No genes
Enoyl-CoA hydratase (EC 4.2.1.17) Psest_2654 N.D.
  Psest_3969 -0.4
  Psest_4235 -0.0
Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) Psest_3109 +0.2
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.-) No genes
Predicted transcriptional regulator of leucine degradation pathway, MerR family No genes
Probable acyl-CoA dehydrogenase (EC 1.3.99.3) Psest_2447 -0.4
  Psest_2669 +0.0
Transcriptional regulator BkdR of isoleucine and valine catabolism operon Psest_0571 -0.3
  Psest_0920 -0.4
phosphotransbutyrylase (EC 2.3.1.19) No genes

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