SEED Subsystem: Protocatechuate branch of beta-ketoadipate pathway in Cupriavidus basilensis FW507-4G11

Experiments:

Role Gene Name Protocatechuic Acid (C)  
⨯
3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) RR42_RS25850 -0.1
  RR42_RS32055 -2.4
3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) RR42_RS10005 +0.4
  RR42_RS22970 +0.6
  RR42_RS35925 -0.9
3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) RR42_RS10010 -0.3
  RR42_RS22965 +0.1
  RR42_RS35920 -0.9
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase RR42_RS20725 -0.4
4-carboxymuconolactone decarboxylase (EC 4.1.1.44) RR42_RS02890 -0.0
Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) RR42_RS00755 -0.6
  RR42_RS10565 -0.0
  RR42_RS10690 -0.1
  RR42_RS21850 +0.9
  RR42_RS24710 N.D.
  RR42_RS30700 -0.0
  RR42_RS32050 -3.2
Beta-ketoadipyl CoA thiolase (EC 2.3.1.-) No genes
Pca regulon regulatory protein PcaR RR42_RS21530 +0.4
PhaK-like protein No genes
Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) RR42_RS32060 -4.6
Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) RR42_RS32065 -4.2
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) RR42_RS06555 +0.9
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) RR42_RS06560 N.D.
dicarboxylic acid transporter PcaT RR42_RS21430 -0.0
  RR42_RS33875 +0.2

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