SEED Subsystem: Lysine Biosynthesis DAP Pathway in Klebsiella michiganensis M5al

Experiments:

Role Gene Name RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x  
⨯
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) No genes
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) BWI76_RS05195 N.D.
Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) BWI76_RS12880 -0.1
  BWI76_RS20385 +0.2
  BWI76_RS26220 N.D.
Aspartokinase (EC 2.7.2.4) BWI76_RS00790 +0.1
  BWI76_RS01790 -1.3
  BWI76_RS04245 -1.1
Diaminopimelate decarboxylase (EC 4.1.1.20) BWI76_RS23360 -1.2
Diaminopimelate epimerase (EC 5.1.1.7) BWI76_RS01200 +0.6
Diaminopimelate epimerase alternative form predicted for S.aureus (EC 5.1.1.7) No genes
Dihydrodipicolinate reductase (EC 1.3.1.26) No genes
Dihydrodipicolinate synthase (EC 4.2.1.52) No genes
L,L-diaminopimelate aminotransferase (EC 2.6.1.83) No genes
LL-diaminopimelate aminotransferase, predicted alternative No genes
Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) No genes
N-acetyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.-) No genes
N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47) No genes
N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) BWI76_RS26000 -0.9
N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) No genes
N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) BWI76_RS20870 N.D.

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