SEED Subsystem: Lactate utilization in Pseudomonas fluorescens FW300-N1B4

Experiments:

Role Gene Name Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1  
⨯
D-Lactate dehydrogenase (EC 1.1.2.5) No genes
L-lactate dehydrogenase (EC 1.1.2.3) No genes
L-lactate permease Pf1N1B4_1186 -0.3
  Pf1N1B4_4246 -0.1
Lactate-responsive regulator LldR in Actinobacteria, GntR family No genes
Lactate-responsive regulator LldR in Betaproteobacteria, LysR family No genes
Lactate-responsive regulator LldR in Enterobacteria, GntR family Pf1N1B4_1185 +4.3
Lactate-responsive regulator LldR in Firmicutes, GntR family No genes
Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing Pf1N1B4_1190 +1.5
Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE Pf1N1B4_1187 +0.7
Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF Pf1N1B4_1188 +1.0
  Pf1N1B4_2440 +0.1
Predicted L-lactate dehydrogenase, hypothetical protein subunit SO1518 No genes
Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG Pf1N1B4_1189 +1.2
Predicted Lactate-responsive regulator, IclR family No genes
Predicted Lactate-responsive regulator, LysR family No genes
Predicted lactate-responsive transcriptional regulator of ykgEFG LDH gene cluster, LysR-type No genes

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