| Pathway | Steps Found |
|---|
| superpathway of aromatic amino acid biosynthesis | 17 / 18 |
| tRNA charging | 19 / 21 |
| superpathway of branched chain amino acid biosynthesis | 16 / 17 |
| chorismate biosynthesis II (archaea) | 12 / 12 |
| cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) | 14 / 15 |
| superpathway of L-lysine, L-threonine and L-methionine biosynthesis II | 14 / 15 |
| adenosylcobalamin biosynthesis I (anaerobic) | 29 / 36 |
| gluconeogenesis II (Methanobacterium thermoautotrophicum) | 16 / 18 |
| L-arginine biosynthesis II (acetyl cycle) | 10 / 10 |
| glycolysis V (Pyrococcus) | 10 / 10 |
| superpathway of L-isoleucine biosynthesis I | 12 / 13 |
| superpathway of L-tryptophan biosynthesis | 12 / 13 |
| L-arginine biosynthesis I (via L-ornithine) | 9 / 9 |
| L-isoleucine biosynthesis II | 8 / 8 |
| superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis | 15 / 18 |
| superpathway of histidine, purine, and pyrimidine biosynthesis | 35 / 46 |
| 3-dehydroquinate biosynthesis II (archaea) | 7 / 7 |
| L-lysine biosynthesis VI | 7 / 7 |
| superpathway of purine nucleotides de novo biosynthesis I | 17 / 21 |
| L-histidine biosynthesis | 9 / 10 |
| superpathway of L-phenylalanine biosynthesis | 9 / 10 |
| superpathway of L-tyrosine biosynthesis | 9 / 10 |
| L-leucine biosynthesis | 6 / 6 |
| L-tryptophan biosynthesis | 6 / 6 |
| UMP biosynthesis II | 6 / 6 |
| methanogenesis from H2 and CO2 | 6 / 6 |
| methyl-coenzyme M oxidation to CO2 II | 6 / 6 |
| superpathway of 5-aminoimidazole ribonucleotide biosynthesis | 6 / 6 |
| superpathway of L-threonine biosynthesis | 6 / 6 |
| tetrapyrrole biosynthesis I (from glutamate) | 6 / 6 |
| L-arginine biosynthesis III (via N-acetyl-L-citrulline) | 8 / 9 |
| L-lysine biosynthesis I | 8 / 9 |
| formaldehyde assimilation II (assimilatory RuMP Cycle) | 8 / 9 |
| superpathway of pyrimidine ribonucleotides de novo biosynthesis | 8 / 9 |
| 5-aminoimidazole ribonucleotide biosynthesis I | 5 / 5 |
| 5-aminoimidazole ribonucleotide biosynthesis II | 5 / 5 |
| L-ornithine biosynthesis I | 5 / 5 |
| UDP-N-acetyl-D-glucosamine biosynthesis I | 5 / 5 |
| chorismate biosynthesis from 3-dehydroquinate | 5 / 5 |
| factor 420 biosynthesis I (archaea) | 5 / 5 |
| pentose phosphate pathway (non-oxidative branch) I | 5 / 5 |
| superpathway of coenzyme A biosynthesis III (mammals) | 5 / 5 |
| thiamine diphosphate salvage II | 5 / 5 |
| formaldehyde assimilation III (dihydroxyacetone cycle) | 10 / 12 |
| L-asparagine biosynthesis III (tRNA-dependent) | 4 / 4 |
| L-selenocysteine biosynthesis II (archaea and eukaryotes) | 4 / 4 |
| L-valine biosynthesis | 4 / 4 |
| biotin biosynthesis from 8-amino-7-oxononanoate I | 4 / 4 |
| coenzyme A biosynthesis I (bacteria) | 4 / 4 |
| coenzyme A biosynthesis II (eukaryotic) | 4 / 4 |
| glutaminyl-tRNAgln biosynthesis via transamidation | 4 / 4 |
| pyrimidine deoxyribonucleotide phosphorylation | 4 / 4 |
| siroheme biosynthesis | 4 / 4 |
| superpathway of pyrimidine nucleobases salvage | 4 / 4 |
| glycolysis II (from fructose 6-phosphate) | 9 / 11 |
| superpathway of L-lysine, L-threonine and L-methionine biosynthesis I | 14 / 18 |
| 3-methylbutanol biosynthesis (engineered) | 6 / 7 |
| L-isoleucine biosynthesis I (from threonine) | 6 / 7 |
| L-lysine biosynthesis III | 6 / 7 |
| chorismate biosynthesis I | 6 / 7 |
| incomplete reductive TCA cycle | 6 / 7 |
| pyrimidine deoxyribonucleotides de novo biosynthesis IV | 6 / 7 |
| 2-methyladeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| 5-hydroxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| 5-methoxy-6-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| 5-methoxybenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| 5-methylbenzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| S-adenosyl-L-methionine salvage II | 3 / 3 |
| L-citrulline degradation | 3 / 3 |
| L-homoserine biosynthesis | 3 / 3 |
| L-isoleucine biosynthesis V | 3 / 3 |
| L-phenylalanine biosynthesis I | 3 / 3 |
| L-selenocysteine biosynthesis I (bacteria) | 3 / 3 |
| L-serine biosynthesis I | 3 / 3 |
| L-tyrosine biosynthesis I | 3 / 3 |
| UTP and CTP de novo biosynthesis | 3 / 3 |
| adeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| adenosine ribonucleotides de novo biosynthesis | 3 / 3 |
| adenosylcobalamin biosynthesis from adenosylcobinamide-GDP I | 3 / 3 |
| ammonia assimilation cycle III | 3 / 3 |
| benzimidazolyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 3 / 3 |
| pentose phosphate pathway (partial) | 3 / 3 |
| superpathway of guanine and guanosine salvage | 3 / 3 |
| thiamine diphosphate salvage V | 3 / 3 |
| Rubisco shunt | 8 / 10 |
| flavin biosynthesis II (archaea) | 8 / 10 |
| glycolysis IV | 8 / 10 |
| superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) | 8 / 10 |
| superpathway of arginine and polyamine biosynthesis | 13 / 17 |
| L-isoleucine biosynthesis IV | 5 / 6 |
| L-methionine biosynthesis II | 5 / 6 |
| UMP biosynthesis I | 5 / 6 |
| UMP biosynthesis III | 5 / 6 |
| biotin biosynthesis II | 5 / 6 |
| inosine-5'-phosphate biosynthesis III | 5 / 6 |
| methyl-coenzyme M oxidation to CO2 I | 5 / 6 |
| pentose phosphate pathway (non-oxidative branch) II | 5 / 6 |
| reductive acetyl coenzyme A pathway II (autotrophic methanogens) | 5 / 6 |
| Calvin-Benson-Bassham cycle | 10 / 13 |
| cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) | 10 / 13 |
| gluconeogenesis I | 10 / 13 |
| glycolysis I (from glucose 6-phosphate) | 10 / 13 |
| 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis I | 2 / 2 |
| 8-amino-7-oxononanoate biosynthesis III | 2 / 2 |
| trans, trans-farnesyl diphosphate biosynthesis | 2 / 2 |
| CMP phosphorylation | 2 / 2 |
| L-arginine degradation III (arginine decarboxylase/agmatinase pathway) | 2 / 2 |
| L-glutamate biosynthesis I | 2 / 2 |
| L-phenylalanine biosynthesis III (cytosolic, plants) | 2 / 2 |
| L-threonine biosynthesis | 2 / 2 |
| UDP-α-D-glucose biosynthesis | 2 / 2 |
| archaeosine biosynthesis I | 2 / 2 |
| di-trans,poly-cis-undecaprenyl phosphate biosynthesis | 2 / 2 |
| factor 420 polyglutamylation | 2 / 2 |
| guanine and guanosine salvage I | 2 / 2 |
| hydroxymethylpyrimidine salvage | 2 / 2 |
| malate/L-aspartate shuttle pathway | 2 / 2 |
| pentose phosphate pathway (oxidative branch) II | 2 / 2 |
| putrescine biosynthesis I | 2 / 2 |
| pyrimidine nucleobases salvage II | 2 / 2 |
| pyruvate fermentation to (R)-acetoin II | 2 / 2 |
| pyruvate fermentation to acetate III | 2 / 2 |
| spermidine biosynthesis I | 2 / 2 |
| tRNA splicing II | 2 / 2 |
| thiamine diphosphate biosynthesis I (E. coli) | 2 / 2 |
| thiamine diphosphate biosynthesis II (Bacillus) | 2 / 2 |
| pyrimidine deoxyribonucleotides de novo biosynthesis I | 7 / 9 |
| sucrose biosynthesis I (from photosynthesis) | 7 / 9 |
| superpathway of coenzyme A biosynthesis I (bacteria) | 7 / 9 |
| 3PG-factor 420 biosynthesis | 4 / 5 |
| hypusine biosynthesis | 4 / 5 |
| inosine-5'-phosphate biosynthesis II | 4 / 5 |
| lactate biosynthesis (archaea) | 4 / 5 |
| polyisoprenoid biosynthesis (E. coli) | 4 / 5 |
| pyruvate fermentation to isobutanol (engineered) | 4 / 5 |
| superpathway of adenosine nucleotides de novo biosynthesis I | 4 / 5 |
| gluconeogenesis III | 9 / 12 |
| adenosylcobalamin biosynthesis II (aerobic) | 24 / 33 |
| β-alanine biosynthesis III | 1 / 1 |
| 3-(4-hydroxyphenyl)pyruvate biosynthesis | 1 / 1 |
| 4-hydroxybenzoate biosynthesis II (bacteria) | 1 / 1 |
| 5-hydroxybenzimidazole biosynthesis (anaerobic) | 1 / 1 |
| S-methyl-5'-thioadenosine degradation II | 1 / 1 |
| L-alanine degradation IV | 1 / 1 |
| L-asparagine biosynthesis I | 1 / 1 |
| L-asparagine degradation I | 1 / 1 |
| L-aspartate biosynthesis | 1 / 1 |
| L-aspartate degradation I | 1 / 1 |
| L-glutamine biosynthesis I | 1 / 1 |
| L-glutamine degradation I | 1 / 1 |
| L-glutamine degradation II | 1 / 1 |
| NADP biosynthesis | 1 / 1 |
| PRPP biosynthesis | 1 / 1 |
| S-adenosyl-L-methionine biosynthesis | 1 / 1 |
| UDP-α-D-galactose biosynthesis | 1 / 1 |
| UDP-α-D-glucuronate biosynthesis (from UDP-glucose) | 1 / 1 |
| UDP-N-acetyl-α-D-mannosamine biosynthesis | 1 / 1 |
| UDP-N-acetyl-D-galactosamine biosynthesis I | 1 / 1 |
| acetaldehyde biosynthesis I | 1 / 1 |
| acetate and ATP formation from acetyl-CoA II | 1 / 1 |
| acetate and ATP formation from acetyl-CoA III | 1 / 1 |
| acetate conversion to acetyl-CoA | 1 / 1 |
| alanine racemization | 1 / 1 |
| arginine dependent acid resistance | 1 / 1 |
| coenzyme B/coenzyme M regeneration IV (H2-dependent) | 1 / 1 |
| coenzyme B/coenzyme M regeneration V (formate-dependent) | 1 / 1 |
| formate oxidation to CO2 | 1 / 1 |
| geranyl diphosphate biosynthesis | 1 / 1 |
| geranylgeranyl diphosphate biosynthesis | 1 / 1 |
| guanine and guanosine salvage III | 1 / 1 |
| long-chain fatty acid activation | 1 / 1 |
| methyl-coenzyme M reduction to methane | 1 / 1 |
| nitrogen fixation I (ferredoxin) | 1 / 1 |
| pyridoxal 5'-phosphate biosynthesis II | 1 / 1 |
| pyrimidine nucleobases salvage I | 1 / 1 |
| pyruvate decarboxylation to acetyl CoA III | 1 / 1 |
| sulfur reduction III | 1 / 1 |
| tetrahydrosarcinapterin biosynthesis | 1 / 1 |
| 6-hydroxymethyl-dihydropterin diphosphate biosynthesis V (Pyrococcus) | 3 / 4 |
| all-trans-farnesol biosynthesis | 3 / 4 |
| L-arginine degradation V (arginine deiminase pathway) | 3 / 4 |
| L-methionine biosynthesis IV | 3 / 4 |
| biotin biosynthesis from 8-amino-7-oxononanoate II | 3 / 4 |
| biotin-carboxyl carrier protein assembly | 3 / 4 |
| coenzyme A biosynthesis III (archaea) | 3 / 4 |
| dipicolinate biosynthesis | 3 / 4 |
| dipyrromethane cofactor biosynthesis | 3 / 4 |
| guanosine ribonucleotides de novo biosynthesis | 3 / 4 |
| phosphopantothenate biosynthesis III (archaea) | 3 / 4 |
| superpathway of L-serine and glycine biosynthesis I | 3 / 4 |
| tetrapyrrole biosynthesis II (from glycine) | 3 / 4 |
| glycolysis III (from glucose) | 8 / 11 |
| aspartate superpathway | 18 / 25 |
| 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus) | 5 / 7 |
| UTP and CTP dephosphorylation I | 5 / 7 |
| mevalonate pathway I (eukaryotes and bacteria) | 5 / 7 |
| mevalonate pathway II (haloarchaea) | 5 / 7 |
| pyrimidine deoxyribonucleotides de novo biosynthesis II | 5 / 7 |
| superpathway of purine nucleotide salvage | 10 / 14 |
| (R)-cysteate degradation | 2 / 3 |
| 4-methylphenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 2 / 3 |
| 5'-deoxyadenosine degradation I | 2 / 3 |
| 6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium) | 2 / 3 |
| L-asparagine degradation III (mammalian) | 2 / 3 |
| L-cysteine biosynthesis II (tRNA-dependent) | 2 / 3 |
| L-cysteine biosynthesis IX (Trichomonas vaginalis) | 2 / 3 |
| L-isoleucine degradation II | 2 / 3 |
| L-isoleucine degradation III (oxidative Stickland reaction) | 2 / 3 |
| L-leucine degradation III | 2 / 3 |
| L-leucine degradation V (oxidative Stickland reaction) | 2 / 3 |
| L-methionine degradation I (to L-homocysteine) | 2 / 3 |
| L-proline biosynthesis III (from L-ornithine) | 2 / 3 |
| L-valine degradation II | 2 / 3 |
| L-valine degradation III (oxidative Stickland reaction) | 2 / 3 |
| adenine and adenosine salvage V | 2 / 3 |
| cyanate degradation | 2 / 3 |
| ethanol degradation II | 2 / 3 |
| gallate biosynthesis | 2 / 3 |
| nitric oxide biosynthesis II (mammals) | 2 / 3 |
| phenyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP | 2 / 3 |
| pyruvate fermentation to (R)-acetoin I | 2 / 3 |
| pyruvate fermentation to (S)-acetoin | 2 / 3 |
| pyruvate fermentation to acetate VI | 2 / 3 |
| pyruvate fermentation to acetate and alanine | 2 / 3 |
| pyruvate fermentation to ethanol III | 2 / 3 |
| superpathway of heme b biosynthesis from glutamate | 7 / 10 |
| NAD de novo biosynthesis III | 4 / 6 |
| TCA cycle VIII (Chlamydia) | 4 / 6 |
| adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide | 4 / 6 |
| carbon tetrachloride degradation II | 4 / 6 |
| factor 420 biosynthesis II (mycobacteria) | 4 / 6 |
| glycogen degradation II | 4 / 6 |
| inosine-5'-phosphate biosynthesis I | 4 / 6 |
| methanogenesis from acetate | 4 / 6 |
| superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis | 4 / 6 |
| superpathway of guanosine nucleotides de novo biosynthesis I | 4 / 6 |
| γ-linolenate biosynthesis II (animals) | 1 / 2 |
| (3R)-linalool biosynthesis | 1 / 2 |
| (3S)-linalool biosynthesis | 1 / 2 |
| 2-oxobutanoate degradation II | 1 / 2 |
| 3-dehydroquinate biosynthesis I | 1 / 2 |
| 4-aminobenzoate biosynthesis I | 1 / 2 |
| 5-methoxybenzimidazole biosynthesis (anaerobic) | 1 / 2 |
| 8-amino-7-oxononanoate biosynthesis II | 1 / 2 |
| S-methyl-5'-thioadenosine degradation III | 1 / 2 |
| CO2 fixation into oxaloacetate (anaplerotic) | 1 / 2 |
| L-alanine biosynthesis I | 1 / 2 |
| L-alanine degradation I | 1 / 2 |
| L-alanine degradation V (oxidative Stickland reaction) | 1 / 2 |
| L-glutamate degradation II | 1 / 2 |
| L-homocysteine biosynthesis | 1 / 2 |
| L-lactaldehyde degradation (aerobic) | 1 / 2 |
| L-tryptophan degradation IV (via indole-3-lactate) | 1 / 2 |
| L-tyrosine degradation II | 1 / 2 |
| NAD biosynthesis from nicotinamide | 1 / 2 |
| NAD phosphorylation and transhydrogenation | 1 / 2 |
| NAD salvage pathway IV (from nicotinamide riboside) | 1 / 2 |
| UDP-α-D-galactofuranose biosynthesis | 1 / 2 |
| UDP-α-D-xylose biosynthesis | 1 / 2 |
| acetoacetate degradation (to acetyl CoA) | 1 / 2 |
| adenine and adenosine salvage I | 1 / 2 |
| adenine and adenosine salvage II | 1 / 2 |
| adenosine deoxyribonucleotides de novo biosynthesis I | 1 / 2 |
| adenosylcobinamide-GDP salvage from assorted adenosylcobamides | 1 / 2 |
| aminopropanol phosphate biosynthesis I | 1 / 2 |
| ammonia assimilation cycle I | 1 / 2 |
| ammonia assimilation cycle II | 1 / 2 |
| archaeosine biosynthesis II | 1 / 2 |
| arsenate detoxification III | 1 / 2 |
| atromentin biosynthesis | 1 / 2 |
| cyclic 2,3-bisphosphoglycerate biosynthesis | 1 / 2 |
| ethanol degradation I | 1 / 2 |
| flavin salvage | 1 / 2 |
| glutathione degradation (DUG pathway) | 1 / 2 |
| guanine and guanosine salvage II | 1 / 2 |
| guanosine deoxyribonucleotides de novo biosynthesis I | 1 / 2 |
| hydrogen production VI | 1 / 2 |
| linalool biosynthesis I | 1 / 2 |
| linoleate biosynthesis II (animals) | 1 / 2 |
| octopamine biosynthesis | 1 / 2 |
| phosphatidylserine and phosphatidylethanolamine biosynthesis I | 1 / 2 |
| pseudouridine degradation | 1 / 2 |
| pyrimidine ribonucleosides salvage III | 1 / 2 |
| pyruvate fermentation to ethanol II | 1 / 2 |
| reductive monocarboxylic acid cycle | 1 / 2 |
| ribose phosphorylation | 1 / 2 |
| sedoheptulose bisphosphate bypass | 1 / 2 |
| spermine biosynthesis | 1 / 2 |
| succinate to cytochrome bd oxidase electron transfer | 1 / 2 |
| succinate to cytochrome bo oxidase electron transfer | 1 / 2 |
| superpathway of L-asparagine biosynthesis | 1 / 2 |
| tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate | 1 / 2 |
| thiamine diphosphate salvage I | 1 / 2 |
| thiazole component of thiamine diphosphate biosynthesis IV | 1 / 2 |
| thioredoxin pathway | 1 / 2 |
| L-lysine biosynthesis II | 6 / 9 |
| flavin biosynthesis I (bacteria and plants) | 6 / 9 |
| methoxylated aromatic compound degradation II | 6 / 9 |
| pyrimidine deoxyribonucleotides de novo biosynthesis III | 6 / 9 |
| superpathway of S-adenosyl-L-methionine biosynthesis | 6 / 9 |
| superpathway of L-methionine biosynthesis (transsulfuration) | 6 / 9 |
| superpathway of adenosylcobalamin salvage from cobinamide II | 6 / 9 |
| 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I | 3 / 5 |
| L-arginine degradation XIII (reductive Stickland reaction) | 3 / 5 |
| biotin biosynthesis from 8-amino-7-oxononanoate III | 3 / 5 |
| sucrose degradation II (sucrose synthase) | 3 / 5 |
| superpathway of (R,R)-butanediol biosynthesis | 3 / 5 |
| urea cycle | 3 / 5 |
| homolactic fermentation | 8 / 12 |
| superpathway of anaerobic sucrose degradation | 13 / 19 |
| isoprene biosynthesis II (engineered) | 5 / 8 |
| mevalonate pathway IV (archaea) | 5 / 8 |
| pentose phosphate pathway | 5 / 8 |
| pyrimidine deoxyribonucleotides biosynthesis from CTP | 5 / 8 |
| superpathway of L-homoserine and L-methionine biosynthesis | 5 / 8 |
| superpathway of adenosylcobalamin salvage from cobinamide I | 5 / 8 |
| Bifidobacterium shunt | 10 / 15 |
| 3-chlorocatechol degradation III (meta pathway) | 2 / 4 |
| S-adenosyl-L-methionine salvage I | 2 / 4 |
| erythro-tetrahydrobiopterin biosynthesis I | 2 / 4 |
| threo-tetrahydrobiopterin biosynthesis | 2 / 4 |
| GDP-mannose biosynthesis | 2 / 4 |
| L-arginine degradation VI (arginase 2 pathway) | 2 / 4 |
| L-fucose degradation I | 2 / 4 |
| L-methionine biosynthesis III | 2 / 4 |
| L-phenylalanine degradation III | 2 / 4 |
| L-tyrosine biosynthesis III | 2 / 4 |
| L-tyrosine degradation III | 2 / 4 |
| NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde | 2 / 4 |
| adenosylcobalamin biosynthesis from adenosylcobinamide-GDP II | 2 / 4 |
| arsenic detoxification (bacteria) | 2 / 4 |
| canavanine biosynthesis | 2 / 4 |
| coenzyme B/coenzyme M regeneration I (methanophenazine-dependent) | 2 / 4 |
| glycogen biosynthesis I (from ADP-D-Glucose) | 2 / 4 |
| guanosine nucleotides degradation III | 2 / 4 |
| inosine 5'-phosphate degradation | 2 / 4 |
| methyl phomopsenoate biosynthesis | 2 / 4 |
| phosphopantothenate biosynthesis I | 2 / 4 |
| phytol degradation | 2 / 4 |
| roxarsone (and nitarsone) degradation III | 2 / 4 |
| salidroside biosynthesis | 2 / 4 |
| spermidine biosynthesis II | 2 / 4 |
| spermidine biosynthesis III | 2 / 4 |
| starch degradation III | 2 / 4 |
| starch degradation V | 2 / 4 |
| sucrose degradation IV (sucrose phosphorylase) | 2 / 4 |
| superpathway of L-aspartate and L-asparagine biosynthesis | 2 / 4 |
| superpathway of putrescine biosynthesis | 2 / 4 |
| glycolysis VI (from fructose) | 7 / 11 |
| L-isoleucine biosynthesis III | 4 / 7 |
| anaerobic energy metabolism (invertebrates, cytosol) | 4 / 7 |
| coenzyme M biosynthesis I | 4 / 7 |
| drosopterin and aurodrosopterin biosynthesis | 4 / 7 |
| factor 430 biosynthesis | 4 / 7 |
| superpathway of adenosine nucleotides de novo biosynthesis II | 4 / 7 |
| thiamine diphosphate salvage IV (yeast) | 4 / 7 |
| β-1,4-D-mannosyl-N-acetyl-D-glucosamine degradation | 1 / 3 |
| 2-oxoglutarate decarboxylation to succinyl-CoA | 1 / 3 |
| 2-oxoisovalerate decarboxylation to isobutanoyl-CoA | 1 / 3 |
| 5-methoxy-6-methylbenzimidazole biosynthesis (anaerobic) | 1 / 3 |
| CMP-N-acetylneuraminate biosynthesis II (bacteria) | 1 / 3 |
| D-apiose degradation I | 1 / 3 |
| D-galactose detoxification | 1 / 3 |
| D-sorbitol biosynthesis I | 1 / 3 |
| GDP-α-D-glucose biosynthesis | 1 / 3 |
| L-arginine degradation I (arginase pathway) | 1 / 3 |
| L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway) | 1 / 3 |
| L-aspartate degradation II (aerobic) | 1 / 3 |
| L-aspartate degradation III (anaerobic) | 1 / 3 |
| L-methionine degradation III | 1 / 3 |
| L-ornithine biosynthesis II | 1 / 3 |
| L-phenylalanine degradation II (anaerobic) | 1 / 3 |
| L-tyrosine degradation IV (to 4-methylphenol) | 1 / 3 |
| NAD phosphorylation and dephosphorylation | 1 / 3 |
| NAD salvage pathway III (to nicotinamide riboside) | 1 / 3 |
| UTP and CTP dephosphorylation II | 1 / 3 |
| adenine salvage | 1 / 3 |
| aerobic respiration III (alternative oxidase pathway) | 1 / 3 |
| alkane biosynthesis II | 1 / 3 |
| aminopropylcadaverine biosynthesis | 1 / 3 |
| cardiolipin biosynthesis I | 1 / 3 |
| cardiolipin biosynthesis II | 1 / 3 |
| cardiolipin biosynthesis III | 1 / 3 |
| cellulose degradation II (fungi) | 1 / 3 |
| dTMP de novo biosynthesis (mitochondrial) | 1 / 3 |
| diphthamide biosynthesis I (archaea) | 1 / 3 |
| ethanol degradation III | 1 / 3 |
| ethanol degradation IV | 1 / 3 |
| ethene biosynthesis I (plants) | 1 / 3 |
| glycine biosynthesis II | 1 / 3 |
| glycine cleavage | 1 / 3 |
| indole-3-acetate biosynthesis VI (bacteria) | 1 / 3 |
| ketolysis | 1 / 3 |
| methanogenesis from methoxylated aromatic compounds | 1 / 3 |
| methylglyoxal degradation IV | 1 / 3 |
| methylglyoxal degradation V | 1 / 3 |
| molybdenum cofactor biosynthesis | 1 / 3 |
| oleate biosynthesis I (plants) | 1 / 3 |
| ophiobolin F biosynthesis | 1 / 3 |
| phosphopantothenate biosynthesis II | 1 / 3 |
| plaunotol biosynthesis | 1 / 3 |
| polyhydroxybutanoate biosynthesis | 1 / 3 |
| purine deoxyribonucleosides degradation II | 1 / 3 |
| putrescine biosynthesis II | 1 / 3 |
| pyrimidine deoxyribonucleosides degradation | 1 / 3 |
| pyrimidine deoxyribonucleotides dephosphorylation | 1 / 3 |
| pyruvate decarboxylation to acetyl CoA I | 1 / 3 |
| pyruvate fermentation to acetate I | 1 / 3 |
| pyruvate fermentation to acetate V | 1 / 3 |
| pyruvate fermentation to acetate VII | 1 / 3 |
| pyruvate fermentation to ethanol I | 1 / 3 |
| quinate degradation I | 1 / 3 |
| quinate degradation II | 1 / 3 |
| sucrose biosynthesis III | 1 / 3 |
| sulfolactate degradation III | 1 / 3 |
| superpathway of acetate utilization and formation | 1 / 3 |
| superpathway of ammonia assimilation (plants) | 1 / 3 |
| superpathway of linalool biosynthesis | 1 / 3 |
| thiamine diphosphate biosynthesis III (Staphylococcus) | 1 / 3 |
| thiamine diphosphate biosynthesis IV (eukaryotes) | 1 / 3 |
| trehalose degradation V | 1 / 3 |
| superpathway of pyrimidine ribonucleosides salvage | 6 / 10 |
| C20,20 CDP-archaeol biosynthesis | 3 / 6 |
| NAD de novo biosynthesis I | 3 / 6 |
| NAD de novo biosynthesis IV (anaerobic) | 3 / 6 |
| UDP-N-acetyl-D-glucosamine biosynthesis II | 3 / 6 |
| adenosylcobinamide-GDP salvage from cobinamide II | 3 / 6 |
| arsenate detoxification I | 3 / 6 |
| bisabolene biosynthesis (engineered) | 3 / 6 |
| formaldehyde oxidation I | 3 / 6 |
| flavin biosynthesis III (fungi) | 5 / 9 |
| superpathway of pyrimidine deoxyribonucleoside salvage | 5 / 9 |
| 4-hydroxy-2(1H)-quinolone biosynthesis | 2 / 5 |
| 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia) | 2 / 5 |
| N-(1-deoxy-D-fructos-1-yl)-L-asparagine degradation | 2 / 5 |
| S-methyl-5-thio-α-D-ribose 1-phosphate degradation II | 2 / 5 |
| S-methyl-5-thio-α-D-ribose 1-phosphate degradation III | 2 / 5 |
| trans-4-hydroxy-L-proline degradation I | 2 / 5 |
| D-galactose degradation I (Leloir pathway) | 2 / 5 |
| L-methionine biosynthesis I | 2 / 5 |
| adenosine nucleotides degradation II | 2 / 5 |
| adenosylcobinamide-GDP salvage from cobinamide I | 2 / 5 |
| dZTP biosynthesis | 2 / 5 |
| ectoine biosynthesis | 2 / 5 |
| glucose and glucose-1-phosphate degradation | 2 / 5 |
| isopropanol biosynthesis (engineered) | 2 / 5 |
| ketogenesis | 2 / 5 |
| mono-trans, poly-cis decaprenyl phosphate biosynthesis | 2 / 5 |
| orthanilate degradation | 2 / 5 |
| protocatechuate degradation III (para-cleavage pathway) | 2 / 5 |
| pyruvate fermentation to acetone | 2 / 5 |
| spermine and spermidine degradation I | 2 / 5 |
| sucrose degradation V (sucrose α-glucosidase) | 2 / 5 |
| superpathway of L-cysteine biosynthesis (mammalian) | 2 / 5 |
| superpathway of L-methionine biosynthesis (by sulfhydrylation) | 7 / 12 |
| superpathway of purine nucleotides de novo biosynthesis II | 17 / 26 |
| L-citrulline biosynthesis | 4 / 8 |
| glycogen degradation I | 4 / 8 |
| methanofuran biosynthesis | 4 / 8 |
| mevalonate pathway III (Thermoplasma) | 4 / 8 |
| sucrose biosynthesis II | 4 / 8 |
| superpathway of guanosine nucleotides de novo biosynthesis II | 4 / 8 |
| superpathway of heme b biosynthesis from glycine | 4 / 8 |
| superpathway of polyamine biosynthesis I | 4 / 8 |
| thiamine diphosphate formation from pyrithiamine and oxythiamine (yeast) | 4 / 8 |
| (2S)-ethylmalonyl-CoA biosynthesis | 1 / 4 |
| 2'-deoxymugineic acid phytosiderophore biosynthesis | 1 / 4 |
| 4-hydroxy-3-prenylbenzoate biosynthesis | 1 / 4 |
| 5'-deoxyadenosine degradation II | 1 / 4 |
| 5,6-dimethylbenzimidazole biosynthesis II (anaerobic) | 1 / 4 |
| 7-(3-amino-3-carboxypropyl)-wyosine biosynthesis | 1 / 4 |
| CDP-diacylglycerol biosynthesis I | 1 / 4 |
| CDP-diacylglycerol biosynthesis II | 1 / 4 |
| D-arabinose degradation II | 1 / 4 |
| L-phenylalanine biosynthesis II | 1 / 4 |
| L-serine biosynthesis II | 1 / 4 |
| L-tryptophan degradation VIII (to tryptophol) | 1 / 4 |
| L-tyrosine biosynthesis II | 1 / 4 |
| acridone alkaloid biosynthesis | 1 / 4 |
| adenine and adenosine salvage III | 1 / 4 |
| adenosine deoxyribonucleotides de novo biosynthesis II | 1 / 4 |
| aerobic respiration I (cytochrome c) | 1 / 4 |
| aerobic respiration II (cytochrome c) (yeast) | 1 / 4 |
| assimilatory sulfate reduction I | 1 / 4 |
| assimilatory sulfate reduction IV | 1 / 4 |
| cardiolipin and phosphatidylethanolamine biosynthesis (Xanthomonas) | 1 / 4 |
| catechol degradation to 2-hydroxypentadienoate II | 1 / 4 |
| chitin deacetylation | 1 / 4 |
| cytidine-5'-diphosphate-glycerol biosynthesis | 1 / 4 |
| formaldehyde oxidation VI (H4MPT pathway) | 1 / 4 |
| guanosine deoxyribonucleotides de novo biosynthesis II | 1 / 4 |
| guanosine nucleotides degradation I | 1 / 4 |
| guanosine nucleotides degradation II | 1 / 4 |
| heme b biosynthesis I (aerobic) | 1 / 4 |
| heme b biosynthesis II (oxygen-independent) | 1 / 4 |
| heme b biosynthesis V (aerobic) | 1 / 4 |
| homocysteine and cysteine interconversion | 1 / 4 |
| ipsdienol biosynthesis | 1 / 4 |
| long chain fatty acid ester synthesis (engineered) | 1 / 4 |
| methylwyosine biosynthesis | 1 / 4 |
| oxalate degradation VI | 1 / 4 |
| penicillin G and penicillin V biosynthesis | 1 / 4 |
| phenylacetate degradation II (anaerobic) | 1 / 4 |
| phosphatidylcholine acyl editing | 1 / 4 |
| polybrominated phenols biosynthesis | 1 / 4 |
| preQ0 biosynthesis | 1 / 4 |
| protocatechuate degradation II (ortho-cleavage pathway) | 1 / 4 |
| purine deoxyribonucleosides degradation I | 1 / 4 |
| putrescine degradation III | 1 / 4 |
| pyruvate fermentation to acetate and lactate II | 1 / 4 |
| queuosine biosynthesis I (de novo) | 1 / 4 |
| sucrose degradation III (sucrose invertase) | 1 / 4 |
| sulfolactate degradation II | 1 / 4 |
| superpathway of L-alanine biosynthesis | 1 / 4 |
| taurine biosynthesis II | 1 / 4 |
| tetrahydromonapterin biosynthesis | 1 / 4 |
| wax esters biosynthesis II | 1 / 4 |
| O-antigen building blocks biosynthesis (E. coli) | 6 / 11 |
| colanic acid building blocks biosynthesis | 6 / 11 |
| purine nucleotides degradation II (aerobic) | 6 / 11 |
| reductive TCA cycle I | 6 / 11 |
| L-glutamate and L-glutamine biosynthesis | 3 / 7 |
| UDP-N-acetyl-D-galactosamine biosynthesis II | 3 / 7 |
| superpathway of thiamine diphosphate biosynthesis III (eukaryotes) | 3 / 7 |
| superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) | 8 / 14 |
| superpathway of thiamine diphosphate biosynthesis I | 5 / 10 |
| oxygenic photosynthesis | 10 / 17 |
| superpathway of glucose and xylose degradation | 10 / 17 |
| superpathway of glycolysis and the Entner-Doudoroff pathway | 10 / 17 |
| 3-methyl-branched fatty acid α-oxidation | 2 / 6 |
| 4-amino-3-hydroxybenzoate degradation | 2 / 6 |
| UDP-N-acetyl-D-galactosamine biosynthesis III | 2 / 6 |
| arsenic detoxification (plants) | 2 / 6 |
| coenzyme M biosynthesis II | 2 / 6 |
| norspermidine biosynthesis | 2 / 6 |
| nucleoside and nucleotide degradation (halobacteria) | 2 / 6 |
| phosphatidylglycerol biosynthesis I | 2 / 6 |
| phosphatidylglycerol biosynthesis II | 2 / 6 |
| purine deoxyribonucleosides salvage | 2 / 6 |
| purine ribonucleosides degradation | 2 / 6 |
| superpathway of 2,3-butanediol biosynthesis | 2 / 6 |
| superpathway of L-cysteine biosynthesis (fungi) | 2 / 6 |
| superpathway of sulfolactate degradation | 2 / 6 |
| Entner-Doudoroff pathway I | 4 / 9 |
| Entner-Doudoroff pathway II (non-phosphorylative) | 4 / 9 |
| Entner-Doudoroff pathway III (semi-phosphorylative) | 4 / 9 |
| L-arginine biosynthesis IV (archaea) | 4 / 9 |
| TCA cycle V (2-oxoglutarate synthase) | 4 / 9 |
| chitin biosynthesis | 4 / 9 |
| superpathway of sulfate assimilation and cysteine biosynthesis | 4 / 9 |
| (S)-propane-1,2-diol degradation | 1 / 5 |
| (R)- and (S)-3-hydroxybutanoate biosynthesis (engineered) | 1 / 5 |
| 1,5-anhydrofructose degradation | 1 / 5 |
| 2,3-dihydroxybenzoate degradation | 1 / 5 |
| 4-hydroxybenzoate biosynthesis I (eukaryotes) | 1 / 5 |
| 8-amino-7-oxononanoate biosynthesis IV | 1 / 5 |
| myo-inositol degradation II | 1 / 5 |
| Escherichia coli serotype O:15 O antigen biosynthesis | 1 / 5 |
| Salmonella enterica serotype O:54 O antigen biosynthesis | 1 / 5 |
| CDP-6-deoxy-D-gulose biosynthesis | 1 / 5 |
| CDP-diacylglycerol biosynthesis III | 1 / 5 |
| CMP-N-acetylneuraminate biosynthesis I (eukaryotes) | 1 / 5 |
| L-arginine degradation II (AST pathway) | 1 / 5 |
| L-leucine degradation IV (reductive Stickland reaction) | 1 / 5 |
| L-phenylalanine degradation VI (reductive Stickland reaction) | 1 / 5 |
| L-tryptophan degradation XIII (reductive Stickland reaction) | 1 / 5 |
| L-tyrosine degradation I | 1 / 5 |
| L-tyrosine degradation V (reductive Stickland reaction) | 1 / 5 |
| NAD salvage pathway II (PNC IV cycle) | 1 / 5 |
| acetylene degradation (anaerobic) | 1 / 5 |
| adipate biosynthesis | 1 / 5 |
| adipate degradation | 1 / 5 |
| cytosolic NADPH production (yeast) | 1 / 5 |
| dTDP-β-L-rhamnose biosynthesis | 1 / 5 |
| dTDP-3-acetamido-α-D-fucose biosynthesis | 1 / 5 |
| enterobacterial common antigen biosynthesis | 1 / 5 |
| ethanolamine utilization | 1 / 5 |
| ferrichrome A biosynthesis | 1 / 5 |
| glucosylglycerol biosynthesis | 1 / 5 |
| glutaryl-CoA degradation | 1 / 5 |
| heme b biosynthesis IV (Gram-positive bacteria) | 1 / 5 |
| hydroxycinnamic acid tyramine amides biosynthesis | 1 / 5 |
| mitochondrial NADPH production (yeast) | 1 / 5 |
| octane oxidation | 1 / 5 |
| oxalate degradation III | 1 / 5 |
| phenylethanol biosynthesis | 1 / 5 |
| protein O-mannosylation II (mammals, core M1 and core M2) | 1 / 5 |
| protein O-mannosylation III (mammals, core M3) | 1 / 5 |
| pyrimidine deoxyribonucleosides salvage | 1 / 5 |
| queuosine biosynthesis III (queuosine salvage) | 1 / 5 |
| seleno-amino acid biosynthesis (plants) | 1 / 5 |
| superpathway of L-phenylalanine and L-tyrosine biosynthesis | 1 / 5 |
| superpathway of plastoquinol biosynthesis | 1 / 5 |
| toyocamycin biosynthesis | 1 / 5 |
| superpathway of L-citrulline metabolism | 6 / 12 |
| adenosine nucleotides degradation I | 3 / 8 |
| shinorine biosynthesis | 3 / 8 |
| stellatic acid biosynthesis | 3 / 8 |
| superpathway of polyamine biosynthesis II | 3 / 8 |
| L-methionine salvage cycle III | 5 / 11 |
| superpathway of thiamine diphosphate biosynthesis II | 5 / 11 |
| superpathway of hexitol degradation (bacteria) | 10 / 18 |
| L-Nδ-acetylornithine biosynthesis | 2 / 7 |
| cremeomycin biosynthesis | 2 / 7 |
| glyphosate degradation III | 2 / 7 |
| pyruvate fermentation to butanoate | 2 / 7 |
| pyruvate fermentation to propanoate I | 2 / 7 |
| serotonin degradation | 2 / 7 |
| stachyose degradation | 2 / 7 |
| sulfur oxidation IV (intracellular sulfur) | 2 / 7 |
| toxoflavin biosynthesis | 2 / 7 |
| ureide biosynthesis | 2 / 7 |
| TCA cycle III (animals) | 4 / 10 |
| nucleoside and nucleotide degradation (archaea) | 4 / 10 |
| superpathway of tetrahydrofolate biosynthesis | 4 / 10 |
| γ-glutamyl cycle | 1 / 6 |
| 6-gingerol analog biosynthesis (engineered) | 1 / 6 |
| Escherichia coli serotype O:149/Shigella boydii serotype O1 O antigen biosynthesis | 1 / 6 |
| Escherichia coli serotype O:177 O antigen biosynthesis | 1 / 6 |
| Escherichia coli serotype O:50 O antigen biosynthesis | 1 / 6 |
| Escherichia coli serotype O:56 O antigen biosynthesis | 1 / 6 |
| Escherichia coli serotype O:77/Salmonella enterica serotype O:6,14 O antigen biosynthesis | 1 / 6 |
| Salmonella enterica serotype O:13 O antigen biosynthesis | 1 / 6 |
| DIBOA-glucoside biosynthesis | 1 / 6 |
| FeMo cofactor biosynthesis | 1 / 6 |
| L-arginine degradation XIV (oxidative Stickland reaction) | 1 / 6 |
| L-isoleucine degradation I | 1 / 6 |
| L-leucine degradation I | 1 / 6 |
| NAD(P)/NADPH interconversion | 1 / 6 |
| adlupulone and adhumulone biosynthesis | 1 / 6 |
| colupulone and cohumulone biosynthesis | 1 / 6 |
| dTDP-D-desosamine biosynthesis | 1 / 6 |
| fatty acid salvage | 1 / 6 |
| glyoxylate cycle | 1 / 6 |
| lupulone and humulone biosynthesis | 1 / 6 |
| molybdopterin biosynthesis | 1 / 6 |
| paspaline biosynthesis | 1 / 6 |
| ppGpp metabolism | 1 / 6 |
| pyruvate fermentation to butanol II (engineered) | 1 / 6 |
| stearate biosynthesis I (animals) | 1 / 6 |
| stearate biosynthesis II (bacteria and plants) | 1 / 6 |
| stearate biosynthesis IV | 1 / 6 |
| superpathway of guanosine nucleotides degradation (plants) | 1 / 6 |
| superpathway of heme b biosynthesis from uroporphyrinogen-III | 1 / 6 |
| superpathway of pyrimidine deoxyribonucleosides degradation | 1 / 6 |
| thiazole component of thiamine diphosphate biosynthesis I | 1 / 6 |
| wybutosine biosynthesis | 1 / 6 |
| TCA cycle II (plants and fungi) | 3 / 9 |
| glycerol degradation to butanol | 8 / 16 |
| reductive TCA cycle II | 5 / 12 |
| superpathway of tetrahydrofolate biosynthesis and salvage | 5 / 12 |
| hexitol fermentation to lactate, formate, ethanol and acetate | 10 / 19 |
| (aminomethyl)phosphonate degradation | 2 / 8 |
| 2-deoxy-D-ribose degradation II | 2 / 8 |
| L-rhamnose degradation II | 2 / 8 |
| butanol and isobutanol biosynthesis (engineered) | 2 / 8 |
| grixazone biosynthesis | 2 / 8 |
| pyruvate fermentation to butanol I | 2 / 8 |
| superpathway of polyamine biosynthesis III | 2 / 8 |
| vanchrobactin biosynthesis | 2 / 8 |
| superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle | 12 / 22 |
| C4 photosynthetic carbon assimilation cycle, NAD-ME type | 4 / 11 |
| β-(1,4)-mannan degradation | 1 / 7 |
| (S)-reticuline biosynthesis II | 1 / 7 |
| myo-inositol degradation I | 1 / 7 |
| Escherichia coli serotype O:111/Salmonella enterica serotype O:35 O antigen biosynthesis | 1 / 7 |
| Escherichia coli serotype O:152 O antigen biosynthesis | 1 / 7 |
| Escherichia coli serotype O:157/Salmonella enterica serotype O:30 O antigen biosynthesis | 1 / 7 |
| Escherichia coli serotype O:1B/Salmonella enterica serotype O:42 O antigen biosynthesis | 1 / 7 |
| Escherichia coli serotype O:2 O antigen biosynthesis | 1 / 7 |
| Escherichia coli serotype O:7 O antigen biosynthesis | 1 / 7 |
| Escherichia coli serotype O:71/Salmonella enterica serotype O:28ac O antigen biosynthesis | 1 / 7 |
| Escherichia coli serotype O:85/Salmonella enterica serotype O:17 O antigen biosynthesis | 1 / 7 |
| S-methyl-5-thio-α-D-ribose 1-phosphate degradation I | 1 / 7 |
| Salmonella enterica serotype O:18 O antigen biosynthesis | 1 / 7 |
| Salmonella enterica serotype O:39 O antigen biosynthesis | 1 / 7 |
| Salmonella enterica serotype O:6,7 O antigen biosynthesis | 1 / 7 |
| C4 photosynthetic carbon assimilation cycle, NADP-ME type | 1 / 7 |
| L-cysteine biosynthesis VI (reverse transsulfuration) | 1 / 7 |
| NAD salvage pathway I (PNC VI cycle) | 1 / 7 |
| acetyl-CoA fermentation to butanoate | 1 / 7 |
| arachidonate biosynthesis III (6-desaturase, mammals) | 1 / 7 |
| brassicicene C biosynthesis | 1 / 7 |
| capsaicin biosynthesis | 1 / 7 |
| catechol degradation II (meta-cleavage pathway) | 1 / 7 |
| ceramide degradation by α-oxidation | 1 / 7 |
| chitin degradation I (archaea) | 1 / 7 |
| icosapentaenoate biosynthesis II (6-desaturase, mammals) | 1 / 7 |
| icosapentaenoate biosynthesis III (8-desaturase, mammals) | 1 / 7 |
| lipoprotein posttranslational modification (Gram-negative bacteria) | 1 / 7 |
| pyoluteorin biosynthesis | 1 / 7 |
| spongiadioxin C biosynthesis | 1 / 7 |
| superpathway of purine deoxyribonucleosides degradation | 1 / 7 |
| tRNA splicing I | 1 / 7 |
| thiazole component of thiamine diphosphate biosynthesis II | 1 / 7 |
| thiocoraline biosynthesis | 1 / 7 |
| tetrahydromethanopterin biosynthesis | 6 / 14 |
| superpathway of methanogenesis | 11 / 21 |
| TCA cycle I (prokaryotic) | 3 / 10 |
| archaetidylinositol biosynthesis | 3 / 10 |
| photorespiration II | 3 / 10 |
| reductive acetyl coenzyme A pathway I (homoacetogenic bacteria) | 3 / 10 |
| starch biosynthesis | 3 / 10 |
| superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) | 3 / 10 |
| formaldehyde assimilation I (serine pathway) | 5 / 13 |
| 1,3-propanediol biosynthesis (engineered) | 2 / 9 |
| L-lysine biosynthesis IV | 2 / 9 |
| L-phenylalanine degradation IV (mammalian, via side chain) | 2 / 9 |
| NAD de novo biosynthesis II (from tryptophan) | 2 / 9 |
| TCA cycle IV (2-oxoglutarate decarboxylase) | 2 / 9 |
| TCA cycle VI (Helicobacter) | 2 / 9 |
| TCA cycle VII (acetate-producers) | 2 / 9 |
| UDP-sugars interconversion | 2 / 9 |
| acinetobactin biosynthesis | 2 / 9 |
| allantoin degradation IV (anaerobic) | 2 / 9 |
| nicotine biosynthesis | 2 / 9 |
| photorespiration I | 2 / 9 |
| photorespiration III | 2 / 9 |
| pseudomonine biosynthesis | 2 / 9 |
| reductive glycine pathway of autotrophic CO2 fixation | 2 / 9 |
| superpathway of Clostridium acetobutylicum acidogenic fermentation | 2 / 9 |
| superpathway of fermentation (Chlamydomonas reinhardtii) | 2 / 9 |
| teichuronic acid biosynthesis (B. subtilis 168) | 2 / 9 |
| L-methionine salvage cycle I (bacteria and plants) | 4 / 12 |
| ergotamine biosynthesis | 4 / 12 |
| purine nucleotides degradation I (plants) | 4 / 12 |
| superpathway of fucose and rhamnose degradation | 4 / 12 |
| superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) | 4 / 12 |
| photosynthetic 3-hydroxybutanoate biosynthesis (engineered) | 14 / 26 |
| 2-methylpropene degradation | 1 / 8 |
| 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis II | 1 / 8 |
| Escherichia coli serotype O:104 O antigen biosynthesis | 1 / 8 |
| Escherichia coli serotype O:107 O antigen biosynthesis | 1 / 8 |
| Escherichia coli serotype O:117 O antigen biosynthesis | 1 / 8 |
| Escherichia coli serotype O:127 O antigen biosynthesis | 1 / 8 |
| Escherichia coli serotype O:128 O antigen biosynthesis | 1 / 8 |
| Escherichia coli serotype O:21/Salmonella enterica serotype O:38 O antigen biosynthesis | 1 / 8 |
| Escherichia coli serotype O:49 O antigen biosynthesis | 1 / 8 |
| Escherichia coli serotype O:51/Salmonella enterica serotype O:57 O antigen biosynthesis | 1 / 8 |
| Escherichia coli serotype O:52 O antigen biosynthesis | 1 / 8 |
| Escherichia coli serotype O:55/Salmonella enterica serotype O:50 O antigen biosynthesis | 1 / 8 |
| Escherichia coli serotype O:86 O antigen biosynthesis | 1 / 8 |
| Shigella boydii serotype 6 O antigen biosynthesis | 1 / 8 |
| L-valine degradation I | 1 / 8 |
| anguibactin biosynthesis | 1 / 8 |
| fusicoccin A biosynthesis | 1 / 8 |
| glycogen biosynthesis III (from α-maltose 1-phosphate) | 1 / 8 |
| lactate fermentation to acetate, CO2 and hydrogen (Desulfovibrionales) | 1 / 8 |
| partial TCA cycle (obligate autotrophs) | 1 / 8 |
| polybrominated dihydroxylated diphenyl ethers biosynthesis | 1 / 8 |
| protein O-mannosylation I (yeast) | 1 / 8 |
| superpathway of NAD/NADP - NADH/NADPH interconversion (yeast) | 1 / 8 |
| superpathway of methylglyoxal degradation | 1 / 8 |
| archaetidylserine and archaetidylethanolamine biosynthesis | 3 / 11 |
| pyruvate fermentation to hexanol (engineered) | 3 / 11 |
| superpathway of L-threonine metabolism | 8 / 18 |
| Methanobacterium thermoautotrophicum biosynthetic metabolism | 35 / 56 |
| (2S,3E)-2-amino-4-methoxy-but-3-enoate biosynthesis | 2 / 10 |
| CMP-legionaminate biosynthesis I | 2 / 10 |
| L-lysine biosynthesis V | 2 / 10 |
| L-lysine fermentation to acetate and butanoate | 2 / 10 |
| anaerobic energy metabolism (invertebrates, mitochondrial) | 2 / 10 |
| sphingosine and sphingosine-1-phosphate metabolism | 2 / 10 |
| superpathway of coenzyme A biosynthesis II (plants) | 2 / 10 |
| superpathway of quinolone and alkylquinolone biosynthesis | 2 / 10 |
| tRNA processing | 2 / 10 |
| taxadiene biosynthesis (engineered) | 4 / 13 |
| 1-butanol autotrophic biosynthesis (engineered) | 14 / 27 |
| 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) | 1 / 9 |
| 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic) | 1 / 9 |
| 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent) | 1 / 9 |
| 4-oxopentanoate degradation | 1 / 9 |
| Escherichia coli serotype O:169 O antigen biosynthesis | 1 / 9 |
| Escherichia coli serotype O:183/Shigella boydii serotype O:10 O antigen biosynthesis | 1 / 9 |
| Escherichia coli serotype O:8 O antigen biosynthesis | 1 / 9 |
| cis-geranyl-CoA degradation | 1 / 9 |
| ansatrienin biosynthesis | 1 / 9 |
| aromatic compounds degradation via β-ketoadipate | 1 / 9 |
| chloramphenicol biosynthesis | 1 / 9 |
| folate transformations III (E. coli) | 1 / 9 |
| methylerythritol phosphate pathway I | 1 / 9 |
| methylerythritol phosphate pathway II | 1 / 9 |
| myxochelin A and B biosynthesis | 1 / 9 |
| p-HBAD biosynthesis | 1 / 9 |
| phenylacetate degradation I (aerobic) | 1 / 9 |
| superpathway of L-alanine fermentation (Stickland reaction) | 1 / 9 |
| tunicamycin biosynthesis | 1 / 9 |
| ubiquinol-8 biosynthesis (late decarboxylation) | 1 / 9 |
| valproate β-oxidation | 1 / 9 |
| viridicatumtoxin biosynthesis | 1 / 9 |
| coenzyme B biosynthesis | 6 / 16 |
| arsenic detoxification (yeast) | 3 / 12 |
| superpathway of C1 compounds oxidation to CO2 | 3 / 12 |
| superpathway of glyoxylate bypass and TCA | 3 / 12 |
| superpathway of nicotine biosynthesis | 3 / 12 |
| superpathway of phospholipid biosynthesis III (E. coli) | 3 / 12 |
| superpathway of ubiquinol-8 biosynthesis (early decarboxylation) | 3 / 12 |
| superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass | 13 / 26 |
| biotin biosynthesis I | 5 / 15 |
| superpathway of N-acetylneuraminate degradation | 10 / 22 |
| (S)-reticuline biosynthesis I | 2 / 11 |
| L-glutamate degradation VIII (to propanoate) | 2 / 11 |
| L-methionine salvage cycle II (plants) | 2 / 11 |
| superpathway of L-arginine, putrescine, and 4-aminobutanoate degradation | 2 / 11 |
| heterolactic fermentation | 7 / 18 |
| ethene biosynthesis V (engineered) | 12 / 25 |
| Arg/N-end rule pathway (eukaryotic) | 4 / 14 |
| superpathway of GDP-mannose-derived O-antigen building blocks biosynthesis | 4 / 14 |
| 2,2'-dihydroxybiphenyl degradation | 1 / 10 |
| Escherichia coli serotype O:9 O antigen biosynthesis | 1 / 10 |
| Escherichia coli serotype O:9a O antigen biosynthesis | 1 / 10 |
| meta cleavage pathway of aromatic compounds | 1 / 10 |
| myo-, chiro- and scyllo-inositol degradation | 1 / 10 |
| C25,25 CDP-archaeol biosynthesis | 1 / 10 |
| L-glutamate degradation V (via hydroxyglutarate) | 1 / 10 |
| bacilysin biosynthesis | 1 / 10 |
| clorobiocin biosynthesis | 1 / 10 |
| isoprene biosynthesis I | 1 / 10 |
| methyl tert-butyl ether degradation | 1 / 10 |
| poly(3-O-β-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis | 1 / 10 |
| rosmarinic acid biosynthesis I | 1 / 10 |
| superpathway of enterobacterial common antigen biosynthesis | 1 / 10 |
| superpathway of anaerobic energy metabolism (invertebrates) | 6 / 17 |
| (S)-lactate fermentation to propanoate, acetate and hydrogen | 3 / 13 |
| 3-hydroxypropanoate cycle | 3 / 13 |
| glyoxylate assimilation | 3 / 13 |
| superpathway of Clostridium acetobutylicum solventogenic fermentation | 3 / 13 |
| superpathway of L-arginine and L-ornithine degradation | 3 / 13 |
| superpathway of cardiolipin biosynthesis (bacteria) | 3 / 13 |
| L-glutamate degradation VII (to butanoate) | 2 / 12 |
| bacillibactin biosynthesis | 2 / 12 |
| indole-3-acetate biosynthesis II | 2 / 12 |
| superpathway of sulfide oxidation (phototrophic sulfur bacteria) | 2 / 12 |
| 8-amino-7-oxononanoate biosynthesis I | 1 / 11 |
| NAD salvage (plants) | 1 / 11 |
| enterobactin biosynthesis | 1 / 11 |
| ethylmalonyl-CoA pathway | 1 / 11 |
| folate transformations II (plants) | 1 / 11 |
| gallate degradation III (anaerobic) | 1 / 11 |
| poly(glycerol phosphate) wall teichoic acid biosynthesis | 1 / 11 |
| protein N-glycosylation (Haloferax volcanii) | 1 / 11 |
| pyochelin biosynthesis | 1 / 11 |
| superpathway of candicidin biosynthesis | 1 / 11 |
| superpathway of phenylethylamine degradation | 1 / 11 |
| toluene degradation III (aerobic) (via p-cresol) | 1 / 11 |
| tropane alkaloids biosynthesis | 1 / 11 |
| C4 photosynthetic carbon assimilation cycle, PEPCK type | 3 / 14 |
| peptidoglycan recycling I | 3 / 14 |
| superpathway of NAD biosynthesis in eukaryotes | 3 / 14 |
| guadinomine B biosynthesis | 2 / 13 |
| noradrenaline and adrenaline degradation | 2 / 13 |
| mixed acid fermentation | 4 / 16 |
| poly(ribitol phosphate) wall teichoic acid biosynthesis I (B. subtilis) | 1 / 12 |
| superpathway of ergotamine biosynthesis | 5 / 18 |
| superpathway of glyoxylate cycle and fatty acid degradation | 2 / 14 |
| 2,5-xylenol and 3,5-xylenol degradation | 1 / 13 |
| L-tryptophan degradation V (side chain pathway) | 1 / 13 |
| superpathway of benzoxazinoid glucosides biosynthesis | 1 / 13 |
| toluene degradation IV (aerobic) (via catechol) | 1 / 13 |
| superpathway of L-methionine salvage and degradation | 3 / 16 |
| purine nucleobases degradation I (anaerobic) | 2 / 15 |
| salinosporamide A biosynthesis | 2 / 15 |
| 3-hydroxypropanoate/4-hydroxybutanate cycle | 4 / 18 |
| sporopollenin precursors biosynthesis | 4 / 18 |
| superpathway of purines degradation in plants | 4 / 18 |
| poly(ribitol phosphate) wall teichoic acid biosynthesis II (S. aureus) | 1 / 14 |
| pyrrolomycin biosynthesis | 1 / 14 |
| superpathway of rosmarinic acid biosynthesis | 1 / 14 |
| Ac/N-end rule pathway | 6 / 21 |
| superpathway of Clostridium acetobutylicum acidogenic and solventogenic fermentation | 3 / 17 |
| type I lipoteichoic acid biosynthesis (S. aureus) | 3 / 17 |
| ceramide and sphingolipid recycling and degradation (yeast) | 2 / 16 |
| crotonate fermentation (to acetate and cyclohexane carboxylate) | 2 / 16 |
| superpathway of hyoscyamine (atropine) and scopolamine biosynthesis | 2 / 16 |
| L-tryptophan degradation III (eukaryotic) | 1 / 15 |
| cyclosporin A biosynthesis | 1 / 15 |
| superpathway of CMP-sialic acids biosynthesis | 1 / 15 |
| superpathway of phylloquinol biosynthesis | 1 / 15 |
| superpathway of bitter acids biosynthesis | 3 / 18 |
| superpathway of the 3-hydroxypropanoate cycle | 3 / 18 |
| benzoate fermentation (to acetate and cyclohexane carboxylate) | 2 / 17 |
| superpathway of UDP-N-acetylglucosamine-derived O-antigen building blocks biosynthesis | 7 / 24 |
| cutin biosynthesis | 1 / 16 |
| sulfazecin biosynthesis | 1 / 16 |
| methylaspartate cycle | 3 / 19 |
| superpathway of seleno-compound metabolism | 3 / 19 |
| streptomycin biosynthesis | 2 / 18 |
| aliphatic glucosinolate biosynthesis, side chain elongation cycle | 10 / 30 |
| protein N-glycosylation initial phase (eukaryotic) | 2 / 19 |
| superpathway of dTDP-glucose-derived O-antigen building blocks biosynthesis | 2 / 19 |
| superpathway of ergosterol biosynthesis I | 7 / 26 |
| mycolyl-arabinogalactan-peptidoglycan complex biosynthesis | 1 / 18 |
| toluene degradation VI (anaerobic) | 1 / 18 |
| purine nucleobases degradation II (anaerobic) | 5 / 24 |
| suberin monomers biosynthesis | 2 / 20 |
| superpathway of polybrominated aromatic compound biosynthesis | 2 / 20 |
| superpathway of erythromycin biosynthesis | 1 / 19 |
| superpathway of novobiocin biosynthesis | 1 / 19 |
| superpathway of megalomicin A biosynthesis | 2 / 22 |
| H. pylori 26695 O-antigen biosynthesis | 1 / 21 |
| superpathway of bacteriochlorophyll a biosynthesis | 4 / 26 |
| superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis | 9 / 33 |
| phenolphthiocerol biosynthesis | 1 / 23 |
| platensimycin biosynthesis | 3 / 26 |
| superpathway of ergosterol biosynthesis II | 3 / 26 |
| phosalacine biosynthesis | 1 / 25 |
| phosphinothricin tripeptide biosynthesis | 1 / 25 |
| superpathway of phospholipid biosynthesis II (plants) | 3 / 28 |
| superpathway of chorismate metabolism | 25 / 59 |
| anaerobic aromatic compound degradation (Thauera aromatica) | 2 / 27 |
| Amaryllidacea alkaloids biosynthesis | 1 / 26 |
| superpathway of aerobic toluene degradation | 2 / 30 |
| palmitate biosynthesis III | 1 / 29 |
| palmitate biosynthesis II (type II fatty acid synthase) | 2 / 31 |
| superpathway of cholesterol biosynthesis | 7 / 38 |
| corallopyronin A biosynthesis | 1 / 30 |
| colibactin biosynthesis | 6 / 38 |
| oleate β-oxidation | 3 / 35 |
| superpathway of aromatic compound degradation via 3-oxoadipate | 2 / 35 |
| anteiso-branched-chain fatty acid biosynthesis | 1 / 34 |
| even iso-branched-chain fatty acid biosynthesis | 1 / 34 |
| odd iso-branched-chain fatty acid biosynthesis | 1 / 34 |
| superpathway of L-lysine degradation | 5 / 43 |
| superpathway of fatty acid biosynthesis II (plant) | 4 / 43 |
| superpathway of aromatic compound degradation via 2-hydroxypentadienoate | 3 / 42 |
| superpathway of pentose and pentitol degradation | 3 / 42 |
| superpathway of fatty acids biosynthesis (E. coli) | 2 / 53 |