MetaCyc Pathway: aerobic respiration I (cytochrome c) in Rhodanobacter denitrificans FW104-10B01

Add experiment(s):


NADH[in] + 5 H+[in] + a ubiquinone→a ubiquinol + NAD+[in] + 4 H+[out] (EC 7.1.1.2)
LRK54_RS01065
LRK54_RS01070
LRK54_RS01075
LRK54_RS01080
LRK54_RS01085
LRK54_RS01090
LRK54_RS01095
LRK54_RS01100
LRK54_RS01105
LRK54_RS01110
LRK54_RS01115
LRK54_RS01125
LRK54_RS01130
LRK54_RS07490
Succinate dehydrogenase (ubiquinone):
succinate[in] + a ubiquinone→a ubiquinol + fumarate[in] (EC 1.3.5.1)
LRK54_RS07475
LRK54_RS07480
LRK54_RS16175
LRK54_RS16180
a ubiquinol + 2 an oxidized c-type cytochrome[out] + 2 H+[in]→2 a reduced c-type cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
LRK54_RS07110
LRK54_RS07120
LRK54_RS07125
LRK54_RS14110
LRK54_RS17215
LRK54_RS17225
LRK54_RS17230

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information